RetrogeneDB ID: | retro_itri_897 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393339.1:9616856..9617083(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PIGP | ||
Ensembl ID: | ENSSTOG00000010943 | ||
Aliases: | None | ||
Description: | phosphatidylinositol glycan anchor biosynthesis, class P [Source:HGNC Symbol;Acc:3046] |
Percent Identity: | 87.01 % |
Parental protein coverage: | 51.7 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | WAFIPESWLNSLGLTYWPQ-KYWAVALPVYLLITIGIGYVLLFGINMMSTSPLNSVHTITDNYAKNQQQK |
WAFIPE..LNSLG.TYW.Q.KYWAV.LPVYLLITIG.GYV.LFGINMMSTSPLNS.HTITDNYAKNQQQK | |
Retrocopy | WAFIPEC*LNSLGITYWHQ<KYWAVELPVYLLITIGMGYVFLFGINMMSTSPLNSIHTITDNYAKNQQQK |
Parental | KYQAEAI |
KY.AEAI | |
Retrocopy | KY*AEAI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |