Parental gene: | BGIOSGA004194 |
| Aliases: | None |
| Description: | None |
| Organism: | Rice subsp. indica (Oryza sativa indica) |
| Coordinates: | 1:31125358..31127429(+) |
>BGIOSGA004194
ATGTGGCCTCTCCTCCTCCGCGCCGCCGTCGTCTACGCGGCGCTGCTCGCCGCCGGCGAGGCGGACGGCTCCCACGATGT
CCTCGACATCTTCGGCACGCGCTCCGAGAGCGACTACTACCGTAACGCGTTCCAGGGGAGGCAGGGGCAGGCGGTGCCGC
TGCCGCGTGGAGGCGGCCTCCGCCGCGAGCAGCAGGAGCTCGGCGCCGCGGGCCCGGGCGGTAGCGGGCTCTCGAAGGCG
CCGCCTCGGTCCGCGCCCAGCAAGGTGGCTCTGGACAGCCTGAAGCTCCCCGTGGACACCTCCGCGGGCTTCGCTGGCGG
GTGGAACCTGGTGAGCGAGAACTCCGGCGTGTCCGCCATGCACCTGGTGGTCATGCAGCACGGCAAGGCCATAATGTTCG
ACACGTGCACGACGGGACGTTCGCTGATGCGGCTGCCCCCGGGCAGATGCCGCCCTGACCCCCGGAGCAAGCAGCCCGGC
GCCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAACACCGGCGCGCTCCGCTCTCTCAAGATCGTGACGGACAC
GTGGTGCTCGTCGGGGGCGTTCGACGCCGACGGCAACATGGTGCAGACCGGCGGCTTCTTCGAAGGGGACAAGTCTGTCA
GGTACCTGAGCGCATGCGGCACCTGCGACTGGAAGGAGTTTCCCAAGAGCCTTGCCGACGGAAGATGGTACGGGACGCAG
CTGGTGCTCCCGGACGGCAGTTTCATCGTGATCGGCGGCCGACGCGCGTTCAGCTACGAGTTCGTCCCGGCGGCCGGCCG
GGCAAACGCCAGGGCCACGCCTTTGCGTCTGCTCCGGGACACCACCGACGACGTGGAGAACAACCTGTACCCCTTCGTCA
ACCTCCTCCCGGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCATCGTGTTCAACTACAGGACCGGGCAGGTCGTA
CGCGAGCTTCCGATCCTCCCCGGCGGCGCCCGGAACTACCCTGCCTCCGCCATGTCGACGCTTCTGCCCCTGGACCTCCG
CAAAGGGGCCGGCCTTAGCGCGGAGGTCATCATCTGCGGCGGCGCCACCAAGAATGCCTTCAAGCTCGGGGAGACCGGCA
CGTTCCCTCCCGCGCTCCGGGACTGCGCGCGCATCAACCCGTCGAAACCCGGGGCGCGGTGGGCGCTCGACCAGATGCCC
TCGGGCCGCGTCATGGGCGACGTGCTGATCCTGCCCACCGGCGACCTGCTCATGCTGAACGGCGCCGCCAAGGGCTGCTC
CGGCTGGGGGTTCGGCCGGCAGGCGTTGCTGAGCCCTGTGCTGTACTCGCCGTATCTGCGGCGGGGCAAGCGGTTCCGCG
TTCTGAACCCGTCGAACATCCCACGGATGTACCACTCCACCAGCGCGCTTCTCCCCGACGCCACCGTGCTCGTGGCCGGC
AGCAACACCAACTCGGCCTACAACTTCAGCGGCGTGGACTTCCCGACCGAGGTGCGCGTCGAGCGGTTCACCCCGCCGTA
CCTCGGCCCGCAGCTGTCCCCCAACCGGCCGGCGATCGACGCGGCGTCCGTCCCCCGCGACGGCATGCGGTACGGCGCCA
GGTTCACGTTCCGGTTCACGACGCCCGCGCAGGGCGTGGGGCAGGGCGACGTCAAGGTGACCATGTACGCGCCGCCGTTC
ACGACGCATGGGTACTCCATGAACCAGCGGCTGCTGATACTGCCCGTCACGGCGTTCGCCGCGCAGGGGCAGCGGCACAC
GGTCACCGTCGACGCGCCGCCCAAGCCGGAGCTCGCGCCGCCGGGTTACTACATGGTGTACGTGGTGGCGAAGGGGGTGC
CGAGCAAGGCTGCGTGGGTGAAGATGCACAAGTAA
ATGTGGCCTCTCCTCCTCCGCGCCGCCGTCGTCTACGCGGCGCTGCTCGCCGCCGGCGAGGCGGACGGCTCCCACGATGT
CCTCGACATCTTCGGCACGCGCTCCGAGAGCGACTACTACCGTAACGCGTTCCAGGGGAGGCAGGGGCAGGCGGTGCCGC
TGCCGCGTGGAGGCGGCCTCCGCCGCGAGCAGCAGGAGCTCGGCGCCGCGGGCCCGGGCGGTAGCGGGCTCTCGAAGGCG
CCGCCTCGGTCCGCGCCCAGCAAGGTGGCTCTGGACAGCCTGAAGCTCCCCGTGGACACCTCCGCGGGCTTCGCTGGCGG
GTGGAACCTGGTGAGCGAGAACTCCGGCGTGTCCGCCATGCACCTGGTGGTCATGCAGCACGGCAAGGCCATAATGTTCG
ACACGTGCACGACGGGACGTTCGCTGATGCGGCTGCCCCCGGGCAGATGCCGCCCTGACCCCCGGAGCAAGCAGCCCGGC
GCCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAACACCGGCGCGCTCCGCTCTCTCAAGATCGTGACGGACAC
GTGGTGCTCGTCGGGGGCGTTCGACGCCGACGGCAACATGGTGCAGACCGGCGGCTTCTTCGAAGGGGACAAGTCTGTCA
GGTACCTGAGCGCATGCGGCACCTGCGACTGGAAGGAGTTTCCCAAGAGCCTTGCCGACGGAAGATGGTACGGGACGCAG
CTGGTGCTCCCGGACGGCAGTTTCATCGTGATCGGCGGCCGACGCGCGTTCAGCTACGAGTTCGTCCCGGCGGCCGGCCG
GGCAAACGCCAGGGCCACGCCTTTGCGTCTGCTCCGGGACACCACCGACGACGTGGAGAACAACCTGTACCCCTTCGTCA
ACCTCCTCCCGGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCATCGTGTTCAACTACAGGACCGGGCAGGTCGTA
CGCGAGCTTCCGATCCTCCCCGGCGGCGCCCGGAACTACCCTGCCTCCGCCATGTCGACGCTTCTGCCCCTGGACCTCCG
CAAAGGGGCCGGCCTTAGCGCGGAGGTCATCATCTGCGGCGGCGCCACCAAGAATGCCTTCAAGCTCGGGGAGACCGGCA
CGTTCCCTCCCGCGCTCCGGGACTGCGCGCGCATCAACCCGTCGAAACCCGGGGCGCGGTGGGCGCTCGACCAGATGCCC
TCGGGCCGCGTCATGGGCGACGTGCTGATCCTGCCCACCGGCGACCTGCTCATGCTGAACGGCGCCGCCAAGGGCTGCTC
CGGCTGGGGGTTCGGCCGGCAGGCGTTGCTGAGCCCTGTGCTGTACTCGCCGTATCTGCGGCGGGGCAAGCGGTTCCGCG
TTCTGAACCCGTCGAACATCCCACGGATGTACCACTCCACCAGCGCGCTTCTCCCCGACGCCACCGTGCTCGTGGCCGGC
AGCAACACCAACTCGGCCTACAACTTCAGCGGCGTGGACTTCCCGACCGAGGTGCGCGTCGAGCGGTTCACCCCGCCGTA
CCTCGGCCCGCAGCTGTCCCCCAACCGGCCGGCGATCGACGCGGCGTCCGTCCCCCGCGACGGCATGCGGTACGGCGCCA
GGTTCACGTTCCGGTTCACGACGCCCGCGCAGGGCGTGGGGCAGGGCGACGTCAAGGTGACCATGTACGCGCCGCCGTTC
ACGACGCATGGGTACTCCATGAACCAGCGGCTGCTGATACTGCCCGTCACGGCGTTCGCCGCGCAGGGGCAGCGGCACAC
GGTCACCGTCGACGCGCCGCCCAAGCCGGAGCTCGCGCCGCCGGGTTACTACATGGTGTACGTGGTGGCGAAGGGGGTGC
CGAGCAAGGCTGCGTGGGTGAAGATGCACAAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Brachypodium distachyon | BRADI2G46477 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM01G30230 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI01G24080 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0215900 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0677000 | ortholog_one2one | 1 retrogene | |
| Setaria italica | Si004698m.g | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oind_16 | 72.29 | 89.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all BGIOSGA004194 retrocopies