Parental gene: | OMERI01G24080, OMERI01G24080 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza meridionalis |
| Coordinates: | 1:25481830..25486605(+) |
>OMERI01G24080
ATGTGGCCTCTCCTCCGCGCCGCCGTCGTCTACGCGGCGCTGCTCGCCGCCGGCGAGGCGGACGGCTCCCACGATGTCCT
CGACATCTTCGGCACGCGCTCCGAGAGCGACTACTACCGTAACGCGTTCCAGGGGAGGCAGGGGCAGGCGGTGCCGCTAC
CGCGTGGAGGCGGCCTCCGCCGCGAGCAGCAGGAGCTCGGCGCCGCGGGCCCGGGCGGTAGCGGGCTCTCGAATGCGCCG
CATCGGTCCGCGCCCAGCAAGGTGGCTCTGGACAGCCTGAAGCTCCCCGTGGACACCTCCGCGGGCTTCGCTGGCGGGTG
GAACCTGGTGAGCGAGAACTCCGGCGTGTCCGCCATGCACCTGGTGGTCATGCGGCACGGCAAGGCCATAATGTTCGACA
CGTGCACGACGGGACGTTCGCTGATGCGGCTGCCCCCGGGCGGATGCCGCCCTGACCCCCGGAGCAAGCAGCCCGGCGCC
ATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAACACCGGCGCGCTCCGCTCTCTCAAGATCATGACGGACACGTG
GTGCTCGTCGGGCGCGTTCGACGCCGACGGCAACATGGTGCAGACCGGCGGCTTCTTCGAAGGGGACAAGTCTGTCAGGT
ACCTGAGCGCATGCGGCACCTGCGACTGGAAGGAGTTTCCCAAGAGCCTTGCCGACGGAAGATGGTACGGGACGCAGCTG
GTGCTCCCGGACGGCAGCTTCATCGTGATCGGCGGCCGACGCGCGTTCAGCTACGAGTTCGTCCCGGCGGCCGGCCGGGC
GAACGCCAAGGCCACGCCTTTGCGTCTGCTTCGGGACACCACCGACGACGTGGAGAACAACCTGTACCCCTTCGTCAACC
TCCTCCCGGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCATCGTGTTCAACTACAGGACCGGGCAGGTCGTACGC
GAGCTTCCGATCCTTCCCGGCGGCGCCCGGAACTACCCTGCCTCCGCCATGTCGACGCTTCTGCCCCTGGACCTCCGCAA
AGGGGCCGGCCTTAGCGCGGAGGTCATCATCTGCGGCGGCGCCACCAAGAACGCCTTCAAGCTCGGCGAGACCGGCACGT
TCCCTCCCGCGCTCCGGGACTGCGCGCGCATCAACCCGTCGAAACCCGGGGCGCGGTGGGCGCTCGACCAGATGCCCTCG
GGCCGCGTCATGGGCGACGTGCTGATCCTGCCCACCGGCGACCTGCTCATGCTGAACGGCGCCGCCAAGGGCTGCTCCGG
CTGGGGGTTCGGCCGGCAGGCGTTGCTGAGCCCTGTGCTGTACTCGCCGTATCTGCGGCGGGGCAAGCGGTTCCGCGTTC
TGAACCCGTCGAACATCCCACGGATGTACCACTCCACCAGCGCGCTTCTCCCCGACGCCACCGTGCTCGTGGCCGGCAGC
AACACCAACTCGGCCTACAACTTCAGCGGCGTGGACTTCCCGACCGAGGTGCGCGTCGAGCGGTTCACCCCGCCGTACCT
CGGCCCGCAGCTGTCCCCCAACCGGCCGGCGATCGACGCGGCGTCCGTCCCCGGCGACGGCATGCGGTACGGCGCCAGGT
TCACGTTCCGGTTCACGACGCCCGCGCAGGGCGTGGGGCAGGGCGACGTCAAGGTGACCATGTACGCGCCGCCGTTCTCG
ACGCATGGGTATTCCATGAACCAGCGGCTGCTGATACTGCCCGTCACGGCGTTCGCCGCGCAGGGGCAGCGGCACACGGT
CACCGTCGACGCGCCGCCCAAGCCGGAGCTCGCGCCGCCGGGTTACTACATGGTGTACGTGGTGGCGAAGGGGGTGCCGA
GCAAGGCCGCGTGGGTGAAGATACACAAGTAA
ATGTGGCCTCTCCTCCGCGCCGCCGTCGTCTACGCGGCGCTGCTCGCCGCCGGCGAGGCGGACGGCTCCCACGATGTCCT
CGACATCTTCGGCACGCGCTCCGAGAGCGACTACTACCGTAACGCGTTCCAGGGGAGGCAGGGGCAGGCGGTGCCGCTAC
CGCGTGGAGGCGGCCTCCGCCGCGAGCAGCAGGAGCTCGGCGCCGCGGGCCCGGGCGGTAGCGGGCTCTCGAATGCGCCG
CATCGGTCCGCGCCCAGCAAGGTGGCTCTGGACAGCCTGAAGCTCCCCGTGGACACCTCCGCGGGCTTCGCTGGCGGGTG
GAACCTGGTGAGCGAGAACTCCGGCGTGTCCGCCATGCACCTGGTGGTCATGCGGCACGGCAAGGCCATAATGTTCGACA
CGTGCACGACGGGACGTTCGCTGATGCGGCTGCCCCCGGGCGGATGCCGCCCTGACCCCCGGAGCAAGCAGCCCGGCGCC
ATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAACACCGGCGCGCTCCGCTCTCTCAAGATCATGACGGACACGTG
GTGCTCGTCGGGCGCGTTCGACGCCGACGGCAACATGGTGCAGACCGGCGGCTTCTTCGAAGGGGACAAGTCTGTCAGGT
ACCTGAGCGCATGCGGCACCTGCGACTGGAAGGAGTTTCCCAAGAGCCTTGCCGACGGAAGATGGTACGGGACGCAGCTG
GTGCTCCCGGACGGCAGCTTCATCGTGATCGGCGGCCGACGCGCGTTCAGCTACGAGTTCGTCCCGGCGGCCGGCCGGGC
GAACGCCAAGGCCACGCCTTTGCGTCTGCTTCGGGACACCACCGACGACGTGGAGAACAACCTGTACCCCTTCGTCAACC
TCCTCCCGGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCATCGTGTTCAACTACAGGACCGGGCAGGTCGTACGC
GAGCTTCCGATCCTTCCCGGCGGCGCCCGGAACTACCCTGCCTCCGCCATGTCGACGCTTCTGCCCCTGGACCTCCGCAA
AGGGGCCGGCCTTAGCGCGGAGGTCATCATCTGCGGCGGCGCCACCAAGAACGCCTTCAAGCTCGGCGAGACCGGCACGT
TCCCTCCCGCGCTCCGGGACTGCGCGCGCATCAACCCGTCGAAACCCGGGGCGCGGTGGGCGCTCGACCAGATGCCCTCG
GGCCGCGTCATGGGCGACGTGCTGATCCTGCCCACCGGCGACCTGCTCATGCTGAACGGCGCCGCCAAGGGCTGCTCCGG
CTGGGGGTTCGGCCGGCAGGCGTTGCTGAGCCCTGTGCTGTACTCGCCGTATCTGCGGCGGGGCAAGCGGTTCCGCGTTC
TGAACCCGTCGAACATCCCACGGATGTACCACTCCACCAGCGCGCTTCTCCCCGACGCCACCGTGCTCGTGGCCGGCAGC
AACACCAACTCGGCCTACAACTTCAGCGGCGTGGACTTCCCGACCGAGGTGCGCGTCGAGCGGTTCACCCCGCCGTACCT
CGGCCCGCAGCTGTCCCCCAACCGGCCGGCGATCGACGCGGCGTCCGTCCCCGGCGACGGCATGCGGTACGGCGCCAGGT
TCACGTTCCGGTTCACGACGCCCGCGCAGGGCGTGGGGCAGGGCGACGTCAAGGTGACCATGTACGCGCCGCCGTTCTCG
ACGCATGGGTATTCCATGAACCAGCGGCTGCTGATACTGCCCGTCACGGCGTTCGCCGCGCAGGGGCAGCGGCACACGGT
CACCGTCGACGCGCCGCCCAAGCCGGAGCTCGCGCCGCCGGGTTACTACATGGTGTACGTGGTGGCGAAGGGGGTGCCGA
GCAAGGCCGCGTGGGTGAAGATACACAAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA004194 | ortholog_one2one | 1 retrogene | |
| Brachypodium distachyon | BRADI2G46477 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM01G30230 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0215900 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0677000 | ortholog_one2one | 1 retrogene | |
| Setaria italica | Si004698m.g | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_omer_13 | 72.11 | 89.89 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OMERI01G24080 retrocopies