Parental gene: | ORGLA01G0215900 |
| Aliases: | None |
| Description: | None |
| Organism: | African rice (Oryza glaberrima) |
| Coordinates: | 1:19913365..19915436(+) |
>ORGLA01G0215900
ATGTGGCCTCTCCTCCTCCGCGCCGCCGTCGTCTACGCGGCGCTGCTCGCCGCCGGCGAGGCGGACGGCTCCCACGATGT
CCTCGACATCTTCGGCACGCGCTCCGAGAGCGACTACTACCGTAACGCGTTCCAGGGGAGGCAGGGGCAGGCGGTGCCGC
TGCCGCGTGGAGGCGGCCTCCGCCGCGAGCAGCAGGAGCTCGGCGCCGCGGGCCCGGGCGGTAGCGGGCTCTCGAAGGCG
CTGCCTCGGTCCGCGCCCAGCAAGGTGGCTCTGGACAGCCTGAAGCTCCCCGTGGACACCTCCGCGGGCTTCGCTGGCGG
GTGGAACCTGGTGAGCGAGAACTCCGGCGTGTCCGCCATGCACCTGGTGGTCATGCGGCACGGCAAGGCCATAATGTTCG
ACACGTGCACGACGGGACGTTCGCTGATGCGGCTGCCCCCGGGCAGATGCCGCCCTGACCCCCGGAGCAAGCAGCCCGGC
GCCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAACACCGGCGCGCTCCGCTCTCTCAAGATCGTGACGGACAC
GTGGTGCTCGTCGGGGGCGTTCGACGCCGACGGCAACATGGTGCAGACCGGCGGCTTCTTCGAAGGGGACAAGTCTGTCA
GGTACCTGAGCGCATGCGGCACCTGCGACTGGAAGGAGTTTCCCAAGAGCCTTGCCGATGGAAGATGGTACGGGACGCAG
CTGGTGCTCCCGGACGGCAGTTTCATCGTGATCGGCGGCCGACGCGCGTTCAGCTACGAGTTCGTCCCGGCGGCCGGCCG
GGCAAACGCCAGGGCCACGCCTTTGCGTCTGCTCCGGGACACCACCGACGACGTGGAGAACAACCTGTACCCCTTCGTCA
ACCTCCTCCCGGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCATCGTGTTCAACTACAGGACCGGGCAGGTCGTA
CGCGAGCTTCCGATCCTCCCCGGCGGCGCCCGGAACTACCCTGCCTCCGCCATGTCGACGCTTCTGCCCCTGGACCTCCG
CAAAGGGGCCGGCCTTAGCGCGGAGGTCATCATCTGCGGCGGCGCCACCAAGAATGCCTTCAAGCTCGGCGAGACCGGCA
CGTTCCCTCCCGCGCTCCGGGACTGCGCGCGCATCAACCCGTCGAAACCCGGGGCGCGGTGGGCGCTCGACCAGATGCCC
TCGGGCCGCGTCATGGGCGACGTGCTGATCCTGCCCACCGGCGACCTGCTCATGCTGAACGGCGCCGCCAAGGGCTGCTC
CGGCTGGGGGTTCGGCCGGCAGGCGTTGCTGAGCCCTGTGCTGTACTCGCCGTATCTGCGGCGGGGCAAGCGGTTCCGCG
TTCTGAACCCGTCAAACATCCCACGGATGTACCACTCCACCAGCGCGCTTCTCCCCGACGCCACCGTGCTCGTGGCCGGC
AGCAACACCAACTCGGCCTACAACTTCAGCGGCGTGGACTTCCCGACCGAGGTGCGCGTCGAGCGGTTCACCCCGCCGTA
CCTCGGCCCGCAGCTGTCCCCCAACCGGCCGGCGATCGACGCGGCGTCCGTCCCCGGCGACGGCATGCGGTACGGCGCCA
GGTTCACGTTCCGGTTCACGACGCCCGCGCAGGGCGTGGGGCAGGGCGACGTCAAGGTGACCATGTACGCGCCGCCGTTC
ACGACGCATGGGTACTCCATGAACCAGCGGCTGCTGATACTGCCCGTCACGGCGTTCGCCGCGCAGGGGCAGCGGCACAC
GGTCACCGTCGACGCGCCGCCCAAGCCGGAGCTCGCGCCGCCGGGTTACTACATGGTGTACGTGGTGGCGAAGGGGGTGC
CGAGCAAGGCTGCGTGGGTGAAGACGCACAAGTAA
ATGTGGCCTCTCCTCCTCCGCGCCGCCGTCGTCTACGCGGCGCTGCTCGCCGCCGGCGAGGCGGACGGCTCCCACGATGT
CCTCGACATCTTCGGCACGCGCTCCGAGAGCGACTACTACCGTAACGCGTTCCAGGGGAGGCAGGGGCAGGCGGTGCCGC
TGCCGCGTGGAGGCGGCCTCCGCCGCGAGCAGCAGGAGCTCGGCGCCGCGGGCCCGGGCGGTAGCGGGCTCTCGAAGGCG
CTGCCTCGGTCCGCGCCCAGCAAGGTGGCTCTGGACAGCCTGAAGCTCCCCGTGGACACCTCCGCGGGCTTCGCTGGCGG
GTGGAACCTGGTGAGCGAGAACTCCGGCGTGTCCGCCATGCACCTGGTGGTCATGCGGCACGGCAAGGCCATAATGTTCG
ACACGTGCACGACGGGACGTTCGCTGATGCGGCTGCCCCCGGGCAGATGCCGCCCTGACCCCCGGAGCAAGCAGCCCGGC
GCCATGGACTGCTGGGCGCACGCCGTGGAGTTCGACTACAACACCGGCGCGCTCCGCTCTCTCAAGATCGTGACGGACAC
GTGGTGCTCGTCGGGGGCGTTCGACGCCGACGGCAACATGGTGCAGACCGGCGGCTTCTTCGAAGGGGACAAGTCTGTCA
GGTACCTGAGCGCATGCGGCACCTGCGACTGGAAGGAGTTTCCCAAGAGCCTTGCCGATGGAAGATGGTACGGGACGCAG
CTGGTGCTCCCGGACGGCAGTTTCATCGTGATCGGCGGCCGACGCGCGTTCAGCTACGAGTTCGTCCCGGCGGCCGGCCG
GGCAAACGCCAGGGCCACGCCTTTGCGTCTGCTCCGGGACACCACCGACGACGTGGAGAACAACCTGTACCCCTTCGTCA
ACCTCCTCCCGGACGGGACCCTCTTCATCTTCGCCAACGACCGCTCCATCGTGTTCAACTACAGGACCGGGCAGGTCGTA
CGCGAGCTTCCGATCCTCCCCGGCGGCGCCCGGAACTACCCTGCCTCCGCCATGTCGACGCTTCTGCCCCTGGACCTCCG
CAAAGGGGCCGGCCTTAGCGCGGAGGTCATCATCTGCGGCGGCGCCACCAAGAATGCCTTCAAGCTCGGCGAGACCGGCA
CGTTCCCTCCCGCGCTCCGGGACTGCGCGCGCATCAACCCGTCGAAACCCGGGGCGCGGTGGGCGCTCGACCAGATGCCC
TCGGGCCGCGTCATGGGCGACGTGCTGATCCTGCCCACCGGCGACCTGCTCATGCTGAACGGCGCCGCCAAGGGCTGCTC
CGGCTGGGGGTTCGGCCGGCAGGCGTTGCTGAGCCCTGTGCTGTACTCGCCGTATCTGCGGCGGGGCAAGCGGTTCCGCG
TTCTGAACCCGTCAAACATCCCACGGATGTACCACTCCACCAGCGCGCTTCTCCCCGACGCCACCGTGCTCGTGGCCGGC
AGCAACACCAACTCGGCCTACAACTTCAGCGGCGTGGACTTCCCGACCGAGGTGCGCGTCGAGCGGTTCACCCCGCCGTA
CCTCGGCCCGCAGCTGTCCCCCAACCGGCCGGCGATCGACGCGGCGTCCGTCCCCGGCGACGGCATGCGGTACGGCGCCA
GGTTCACGTTCCGGTTCACGACGCCCGCGCAGGGCGTGGGGCAGGGCGACGTCAAGGTGACCATGTACGCGCCGCCGTTC
ACGACGCATGGGTACTCCATGAACCAGCGGCTGCTGATACTGCCCGTCACGGCGTTCGCCGCGCAGGGGCAGCGGCACAC
GGTCACCGTCGACGCGCCGCCCAAGCCGGAGCTCGCGCCGCCGGGTTACTACATGGTGTACGTGGTGGCGAAGGGGGTGC
CGAGCAAGGCTGCGTGGGTGAAGACGCACAAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA004194 | ortholog_one2one | 1 retrogene | |
| Brachypodium distachyon | BRADI2G46477 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM01G30230 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI01G24080 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0677000 | ortholog_one2one | 1 retrogene | |
| Setaria italica | Si004698m.g | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogla_7 | 72.24 | 89.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ORGLA01G0215900 retrocopies