Parental gene:

BGIOSGA005956

Aliases:None
Description:None
Organism:Rice subsp. indica (Oryza sativa indica)
Coordinates:2:27516922..27519300(-)


>BGIOSGA005956
ATGGGGCTCGGCGTGAGGGCGGCGCCGTTCACGTACGTGGCGCACGCGCTGGCCGTGGCGGCCGCCACCATGGTGCTGGT
CTGGTGCATCCACTTCCGCGGCGGCCTCGCCTTCGAGGCCACAAACAAGAACCTCATCTTCAACGTTCACCCTGTTCTTA
TGCTTATTGGCTATATAATCCTAGGCAGTGAAGCTATAATGGTATACAAGGTCCTTCCTACTTGGAAGCATGATACAACT
AAGCTGATCCATCTAATTCTCCATGCAATTGCCCTTGTATTCGGTGCGGTTGGGATATACTGCGCTTTCAAATTTCACAA
TGAAAGTGGAATTGCCAACCTCTACAGTCTGCATTCTTGGCTTGGGATTGGAACAATTTGTTTGTATGGTATTCAGTGGA
TATTCGGGTTTGTTGCTTTCTTCTTCCCCCGTGCTTCGCCAAGCGTGAGGAAGGGTGTTCTTCCTTGGCATATACTGTTT
GGGCTCTTCGTCTACATTTTAGCCCTGGCCACCGTAGAACTCGGATTTCTTGAGAAGCTCACTTTCCTCCAAAGCTCAGG
GCTCGACAAATATGGCGCAGAGGCATTTTTGGTGAACTTCACGGCTTTGATTGTTGTGCTATTCGGTGCTTCCGTCGTGG
TTGCTGCTGTTTCTCCTGCTCGCGTTGAAGAACCGCATGAGTATGCTCCAATCCCTGAAAGTTAG

Species Parental gene accession Homology type Retrogenes number
Oryza brachyantha OB02G32980 ortholog_one2one 1 retrogene
retro_obra_5,
Oryza barthii OBART02G25610 ortholog_one2one 1 retrogene
retro_obar_22,
Oryza glumaepatula OGLUM02G26140 ortholog_one2one 1 retrogene
retro_oglu_26,
Oryza nivara ONIVA02G28050 ortholog_one2one 1 retrogene
retro_oniv_34,
Oryza punctata OPUNC02G23460 ortholog_one2one 1 retrogene
retro_opun_42,
Oryza rufipogon ORUFI02G27020 ortholog_one2one 1 retrogene
retro_oruf_43,
Physcomitrella patens PP1S194_18V6 ortholog_many2many 1 retrogene
retro_ppat_14,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oind_56 56.67 88.03
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Download FASTA sequences of all BGIOSGA005956 retrocopies