Parental gene:

BGIOSGA007878

Aliases:None
Description:None
Organism:Rice subsp. indica (Oryza sativa indica)
Coordinates:2:9226243..9227257(+)


>BGIOSGA007878
ATGGGAAAGAGGAAGTCAGCGGCTAAGCCACCACCTAAGAAGAGGATGGACAAGCTTGATACTGTATTTTCCTGCCCATT
CTGCAATCATGGCAGTAGTGTTGAATGCCGGATTGATATGAAGAACCTGATCGGCGAGGCTTCATGTAGGATCTGTCAGG
AAAACTTCAGCACCACTGTCAATGCACTGACTGAACCAATCGACATATATAGCGAATGGATTGATGAGTGCGAGCGTGTC
AACAATGTCGAAGACGACGACGGAGCATGA

Species Parental gene accession Homology type Retrogenes number
Aegilops tauschii F775_28085 ortholog_one2many 1 retrogene
retro_atau_24,
Hordeum vulgare MLOC_14907 ortholog_one2one 3 retrogenes
retro_hvul_85, retro_hvul_89, retro_hvul_97,
Oryza barthii OBART07G23140 ortholog_one2one 1 retrogene
retro_obar_9,
Oryza glumaepatula OGLUM07G23200 ortholog_one2one 1 retrogene
retro_oglu_13,
Oryza nivara ONIVA07G23000 ortholog_one2one 1 retrogene
retro_oniv_49,
Oryza sativa japonica OS07G0631100 ortholog_one2one 1 retrogene
retro_osat_82,
Sorghum bicolor Sb10g003710 ortholog_one2one 1 retrogene
retro_sbic_12,
Setaria italica Si007595m.g ortholog_one2one 2 retrogenes
retro_sita_49, retro_sita_50,
Triticum aestivum Traes_1DL_84C83461E ortholog_one2many 2 retrogenes
retro_taes_162, retro_taes_71,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oind_10 61.73 87.64
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Download FASTA sequences of all BGIOSGA007878 retrocopies