Parental gene: | BGIOSGA018931 |
| Aliases: | None |
| Description: | None |
| Organism: | Rice subsp. indica (Oryza sativa indica) |
| Coordinates: | 5:920336..922822(-) |
>BGIOSGA018931
ATGGCGTCCGTGGATCTGACCCCGAGGCAGGCGAGGAAGGCGTACGGCGGCGATGGTGGGACCTACTACGAGTGGAGCCC
CGCAGACCTGCCCATGCTGGAACTCGCCAACATCGGCGGCGCCAAGCTGTCGCTCAACGCCGGTGGCCTCGCCCTGCCCA
GCTTTTCCGACTCCGGAAAGGTTGCGTATGTTCTTCAAGGCAAGGGCACTTGTGGCATTGTCCTGCCGGAGGCGAGCAAG
GAGAAGGTGATCGCCGTGAAGGAGGGAGACTCCCTGGCACTCCCCTTTGGCGTGGTGACATGGTGGCATAACCTCCCGGA
GTCCCCAATCGAGCTCGTCATCCTCTTCCTCGGCGACACATCGAAGGCGCACAAGGCCGGCCAATTCACAAACATGCAGC
TCACCGGTGCCACCGGCATCTTCACCGGCTTCTCCACGGAGTTCGTCGGCCGCGCATGGGACCTCGCCGAGTCCGACGCC
GTCAAGCTCGTGTCCAGCCAGCCTGCCTCCGGCATCGTCAAGATCAAGTCCGGCCAGAAGCTCCCCGAGCCGTCGGCTGC
CGACCGCGAGGGCATGGCGCTCAACTGCCTGGAGGCGCCGCTCGACGTGGACATCAAGAACGGCGGCCGCGTGGTGGTGC
TCAACACGGCGAACCTGCCGATGGTGAAGGAGGTCGGGCTCGGCGCCGACCTGGTGAGGATCGACGGCCACTCCATGTGC
TCGCCGGGGTTCTCGTGCGACTCGGCGTACCAGGTCACCTACTTCATCCGCGGCAGCGGCCGCGTCCAGGTGGTCGGCGC
CGACGGGAAGCGCGTGCTGGACACCCACGTCGAGGGCGGCAACCTGTTCATCGTGCCGCGCTTCTGCGTCGTCTCCAAGA
TCGCCGACGCCTCCGGCCTGCAGTGGTTCTCCATTATCACCACACCAAACCCGATCTTCAGTCACCTGGCGGGGAAGACG
TCGGTGTGGAAGGCGATCTCGCCGGAGGTGCTGGAGGCGTCGTTCAACGCGACGCCGGAGATGGAGAAGCTGTTCCGGTC
CAAAAGGATCGACTCGGAGATCTTCTTCGCGCCCAACTGA
ATGGCGTCCGTGGATCTGACCCCGAGGCAGGCGAGGAAGGCGTACGGCGGCGATGGTGGGACCTACTACGAGTGGAGCCC
CGCAGACCTGCCCATGCTGGAACTCGCCAACATCGGCGGCGCCAAGCTGTCGCTCAACGCCGGTGGCCTCGCCCTGCCCA
GCTTTTCCGACTCCGGAAAGGTTGCGTATGTTCTTCAAGGCAAGGGCACTTGTGGCATTGTCCTGCCGGAGGCGAGCAAG
GAGAAGGTGATCGCCGTGAAGGAGGGAGACTCCCTGGCACTCCCCTTTGGCGTGGTGACATGGTGGCATAACCTCCCGGA
GTCCCCAATCGAGCTCGTCATCCTCTTCCTCGGCGACACATCGAAGGCGCACAAGGCCGGCCAATTCACAAACATGCAGC
TCACCGGTGCCACCGGCATCTTCACCGGCTTCTCCACGGAGTTCGTCGGCCGCGCATGGGACCTCGCCGAGTCCGACGCC
GTCAAGCTCGTGTCCAGCCAGCCTGCCTCCGGCATCGTCAAGATCAAGTCCGGCCAGAAGCTCCCCGAGCCGTCGGCTGC
CGACCGCGAGGGCATGGCGCTCAACTGCCTGGAGGCGCCGCTCGACGTGGACATCAAGAACGGCGGCCGCGTGGTGGTGC
TCAACACGGCGAACCTGCCGATGGTGAAGGAGGTCGGGCTCGGCGCCGACCTGGTGAGGATCGACGGCCACTCCATGTGC
TCGCCGGGGTTCTCGTGCGACTCGGCGTACCAGGTCACCTACTTCATCCGCGGCAGCGGCCGCGTCCAGGTGGTCGGCGC
CGACGGGAAGCGCGTGCTGGACACCCACGTCGAGGGCGGCAACCTGTTCATCGTGCCGCGCTTCTGCGTCGTCTCCAAGA
TCGCCGACGCCTCCGGCCTGCAGTGGTTCTCCATTATCACCACACCAAACCCGATCTTCAGTCACCTGGCGGGGAAGACG
TCGGTGTGGAAGGCGATCTCGCCGGAGGTGCTGGAGGCGTCGTTCAACGCGACGCCGGAGATGGAGAAGCTGTTCCGGTC
CAAAAGGATCGACTCGGAGATCTTCTTCGCGCCCAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza brachyantha | OB05G11140 | ortholog_one2many | 1 retrogene | |
| Oryza glumaepatula | OGLUM05G01170 | ortholog_one2many | 1 retrogene | |
| Oryza punctata | OPUNC05G01050 | ortholog_one2many | 1 retrogene | |
| Oryza rufipogon | ORUFI05G01180 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS05G0116000 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oind_1 | 76.12 | 99.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all BGIOSGA018931 retrocopies