Parental gene: | OS05G0116000 |
| Aliases: | None |
| Description: | Os05g0116000 protein; Putative legumin; cDNA clone:001-014-A11, full insert sequence; cDNA clone:J033092N18, full insert sequence [Source:UniProtKB/TrEMBL;Acc:Q65XA1] |
| Organism: | Rice subsp. japonica (Oryza sativa japonica) |
| Coordinates: | 5:873166..876094(-) |
>OS05G0116000
ATGGCGTCCGTGGATCTGACCCCGAGGCAGGCGAGGAAGGCGTACGGCGGCGATGGTGGGACCTACTACGAGTGGAGCCC
CGCAGACCTGCCCATGCTGGAACTCGCCAACATCGGCGGCGCCAAGCTGTCGCTCAACGCCGGTGGCCTCGCCCTGCCCA
GCTTTTCCGACTCCGGAAAGGTTGCGTATGTTCTTCAAGGCAAGGGCACTTGTGGCATTGTCCTGCCGGAGGCGAGCAAG
GAGAAGGTGATCGCCGTGAAGGAGGGAGACTCCCTGGCACTCCCCTTTGGCGTGGTGACATGGTGGCATAACCTCCCGGA
GTCCCCAATCGAGCTCGTCATCCTCTTCCTCGGCGACACATCGAAGGCGCACAAGGCCGGCCAATTCACAAACATGCAGC
TCACCGGTGCCACCGGCATCTTCACCGGCTTCTCCACGGAGTTCGTCGGCCGCGCATGGGACCTCGCCGAGTCCGACGCC
GTCAAGCTCGTGTCCAGCCAGCCTGCCTCCGGCATCGTCAAGATCAAGTCCGGCCAGAAGCTCCCCGAGCCGTCGGCCGC
CGACCGCGAGGGCATGGCGCTCAACTGCCTGGAGGCGCCGCTCGACGTGGACATCAAGAACGGCGGCCGCGTGGTGGTGC
TCAACACGGCGAACCTGCCGATGGTGAAGGAGGTCGGGCTCGGCGCCGACCTGGTGAGGATCGACGGCCACTCCATGTGC
TCGCCGGGGTTCTCGTGCGACTCGGCGTACCAGGTCACCTACTTCATCCGCGGCAGCGGCCGCGTCCAGGTGGTCGGCGC
CGACGGGAAGCGCGTGCTGGACACCCACGTCGAGGGCGGCAACCTGTTCATCGTGCCGCGCTTCTGCGTCGTCTCCAAGA
TCGCCGACGCCTCCGGCCTGCAGTGGTTCTCCATTATCACCACACCAAACCCGATCTTCAGTCACCTGGCGGGGAAGACG
TCGGTGTGGAAGGCGATCTCGCCGGAGGTGCTGGAGGCGTCGTTCAACGCGACGCCGGAGATGGAGAAGCTGTTCCGGTC
CAAAAGGATCGACTCGGAGATCTTCTTCGCGCCCAACTGA
ATGGCGTCCGTGGATCTGACCCCGAGGCAGGCGAGGAAGGCGTACGGCGGCGATGGTGGGACCTACTACGAGTGGAGCCC
CGCAGACCTGCCCATGCTGGAACTCGCCAACATCGGCGGCGCCAAGCTGTCGCTCAACGCCGGTGGCCTCGCCCTGCCCA
GCTTTTCCGACTCCGGAAAGGTTGCGTATGTTCTTCAAGGCAAGGGCACTTGTGGCATTGTCCTGCCGGAGGCGAGCAAG
GAGAAGGTGATCGCCGTGAAGGAGGGAGACTCCCTGGCACTCCCCTTTGGCGTGGTGACATGGTGGCATAACCTCCCGGA
GTCCCCAATCGAGCTCGTCATCCTCTTCCTCGGCGACACATCGAAGGCGCACAAGGCCGGCCAATTCACAAACATGCAGC
TCACCGGTGCCACCGGCATCTTCACCGGCTTCTCCACGGAGTTCGTCGGCCGCGCATGGGACCTCGCCGAGTCCGACGCC
GTCAAGCTCGTGTCCAGCCAGCCTGCCTCCGGCATCGTCAAGATCAAGTCCGGCCAGAAGCTCCCCGAGCCGTCGGCCGC
CGACCGCGAGGGCATGGCGCTCAACTGCCTGGAGGCGCCGCTCGACGTGGACATCAAGAACGGCGGCCGCGTGGTGGTGC
TCAACACGGCGAACCTGCCGATGGTGAAGGAGGTCGGGCTCGGCGCCGACCTGGTGAGGATCGACGGCCACTCCATGTGC
TCGCCGGGGTTCTCGTGCGACTCGGCGTACCAGGTCACCTACTTCATCCGCGGCAGCGGCCGCGTCCAGGTGGTCGGCGC
CGACGGGAAGCGCGTGCTGGACACCCACGTCGAGGGCGGCAACCTGTTCATCGTGCCGCGCTTCTGCGTCGTCTCCAAGA
TCGCCGACGCCTCCGGCCTGCAGTGGTTCTCCATTATCACCACACCAAACCCGATCTTCAGTCACCTGGCGGGGAAGACG
TCGGTGTGGAAGGCGATCTCGCCGGAGGTGCTGGAGGCGTCGTTCAACGCGACGCCGGAGATGGAGAAGCTGTTCCGGTC
CAAAAGGATCGACTCGGAGATCTTCTTCGCGCCCAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA018931 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB05G11140 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM05G01170 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA05G01190 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC05G01050 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA05G0012000 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI05G01180 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_osat_27 | 76.69 | 99.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OS05G0116000 retrocopies