Parental gene: | OPUNC05G01050 |
| Aliases: | None |
| Description: | None |
| Organism: | Red rice (Oryza punctata) |
| Coordinates: | 5:812301..814331(-) |
>OPUNC05G01050
ATGGCGTCCGTGGATCTGACCCCGAGGCTGCCGAGGAAGGCGTACGGCGGCGATGGTGGAACCTACTACGAGTGGAGCCC
CGCCGACCTGGCCATGCTGGAAATCGCCAACATCGGCGCCGCCAAGCTCTCCCTCGTCGCCGGTGGCTTCTCCCTGCCCA
GCTTCTCTGACTCCGGCAAGGTCGCCTATGTCCTCCAAGGCAAGGGCACCTGTGGCATTGTTCTACCTGAGGCAAGCAAG
GAGAAGGTGTTAGCCGTGAAGGAGGGCGACGCGCTGGCTCTCCCCTTCGGCGTGGTCACCTGGTGGCACAACCTCCCGGA
GTCCACCACCGAGCTCGTCGTCCTCTTCCTCGGCGACACCTCCAAGGCCCACAAGCCCGGCCAGTTCACCAACATGCAGC
TCACCGGCGCCACCGGCATCTTCACCGGCTTCTCCACCGAGTTTGTCGGCCGCGCATGGGACCTTGCCGAGTCCGACGCT
GCCAAGCTGGTGTCCAGCCAGCCTGCCTCCGGCATCGTCAAGCTCAAGTCCGCCCAGAAGCTCCCCGAGCCATCTCCCGC
CGACCGTGAGGGCATGGCGCTCAACTGCCTCGAGGCGCCGCTCGACGTGGACATCAAGAATGGCGGCCGCGTGGTGGTGC
TCAACACCGCGAACCTGCCGCTGGTGAAGGAGGTCGGGCTCGGCGCCGACCTGGTGAGGATCGACGGCCACTCCATGTGC
TCGCCGGGATTCTCTTGCGACTCCGCGTACCAGGTCACCTACATCGTCCGCGGCAGCGGCCGTGTCCAGGTGGTCGGCAT
CGACGGGAAACGCGTCCTGGAGGCCCGCGTCGAGGCTGGGAATCTCTTCATCGTGCCTCGCTTCTTCGTCGTCTCTAAGA
TCGCTGACGCCTCTGGCTTGCAGTGGTTCTCCATCATTACCACCCCCAACCCGATCTTCAGCCACCTGGCTGGGAGGACA
TCGGTGTGGAAGGCGATCTCGCCGGAGGTGCTGGAGGTGTCGTTCAACACGACGCCGGAGATGGAGAAGCTGTTCCGGTC
GAAGAGGCTGGACTCGGAGATCTTCTTCGCGCCCAACTGA
ATGGCGTCCGTGGATCTGACCCCGAGGCTGCCGAGGAAGGCGTACGGCGGCGATGGTGGAACCTACTACGAGTGGAGCCC
CGCCGACCTGGCCATGCTGGAAATCGCCAACATCGGCGCCGCCAAGCTCTCCCTCGTCGCCGGTGGCTTCTCCCTGCCCA
GCTTCTCTGACTCCGGCAAGGTCGCCTATGTCCTCCAAGGCAAGGGCACCTGTGGCATTGTTCTACCTGAGGCAAGCAAG
GAGAAGGTGTTAGCCGTGAAGGAGGGCGACGCGCTGGCTCTCCCCTTCGGCGTGGTCACCTGGTGGCACAACCTCCCGGA
GTCCACCACCGAGCTCGTCGTCCTCTTCCTCGGCGACACCTCCAAGGCCCACAAGCCCGGCCAGTTCACCAACATGCAGC
TCACCGGCGCCACCGGCATCTTCACCGGCTTCTCCACCGAGTTTGTCGGCCGCGCATGGGACCTTGCCGAGTCCGACGCT
GCCAAGCTGGTGTCCAGCCAGCCTGCCTCCGGCATCGTCAAGCTCAAGTCCGCCCAGAAGCTCCCCGAGCCATCTCCCGC
CGACCGTGAGGGCATGGCGCTCAACTGCCTCGAGGCGCCGCTCGACGTGGACATCAAGAATGGCGGCCGCGTGGTGGTGC
TCAACACCGCGAACCTGCCGCTGGTGAAGGAGGTCGGGCTCGGCGCCGACCTGGTGAGGATCGACGGCCACTCCATGTGC
TCGCCGGGATTCTCTTGCGACTCCGCGTACCAGGTCACCTACATCGTCCGCGGCAGCGGCCGTGTCCAGGTGGTCGGCAT
CGACGGGAAACGCGTCCTGGAGGCCCGCGTCGAGGCTGGGAATCTCTTCATCGTGCCTCGCTTCTTCGTCGTCTCTAAGA
TCGCTGACGCCTCTGGCTTGCAGTGGTTCTCCATCATTACCACCCCCAACCCGATCTTCAGCCACCTGGCTGGGAGGACA
TCGGTGTGGAAGGCGATCTCGCCGGAGGTGCTGGAGGTGTCGTTCAACACGACGCCGGAGATGGAGAAGCTGTTCCGGTC
GAAGAGGCTGGACTCGGAGATCTTCTTCGCGCCCAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA018931 | ortholog_one2many | 1 retrogene | |
| Oryza brachyantha | OB05G11140 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM05G01170 | ortholog_one2one | 1 retrogene | |
| Oryza nivara | ONIVA05G01190 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA05G0012000 | ortholog_one2one | 1 retrogene | |
| Oryza rufipogon | ORUFI05G01180 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS05G0116000 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opun_21 | 80.50 | 99.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OPUNC05G01050 retrocopies