Parental gene:

YPEL1, ENSACAG00000001397

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL343282.1:1339478..1348162(+)


>ENSACAG00000001397
ATGGTAAAGATGACAAAATCCAAAACGTTTCAGGCCTATTTGCCAAATTGTCACCGGACATACAGCTGTATCCACTGCAG
AGCCCATCTAGCTAATCACGATGAGCTGATTTCCAAGTCCTTTCAGGGAAGCCAGGGACGAGCCTACCTCTTTAATTCAG
TGGTGAATGTGGGCTGTGGTCCTGCAGAAGAGAGAGTCCTTTTGACGGGATTGCATGCAGTCGCCGATATTTACTGCGAA
AACTGCAAAACCACCCTTGGATGGAAATACGAGCATGCCTTTGAGAGCAGTCAGAAATACAAAGAAGGGAAATTCATCAT
CGAACTTGCCCACATGATCAAAGACAATGGCTGGGAG

Library Parental gene expression (RPM)
SRP009831_adrenal 0 .56 RPM
SRP009831_brain 8 .24 RPM
SRP009831_dewlap 2 .83 RPM
SRP009831_embryo 3 .32 RPM
SRP009831_heart 1 .76 RPM
SRP009831_liver 0 .33 RPM
SRP009831_lung 3 .02 RPM
SRP009831_ovary 6 .02 RPM
SRP009831_skeletal_muscle 0 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015755 ortholog_one2one 1 retrogene
retro_cjac_597,
Dasypus novemcinctus ENSDNOG00000024482 ortholog_one2many 1 retrogene
retro_dnov_13,
Echinops telfairi ENSETEG00000008187 ortholog_one2one 1 retrogene
retro_etel_1965,
Pteropus vampyrus ENSPVAG00000013638 ortholog_one2one 1 retrogene
retro_pvam_162,
Tursiops truncatus ENSTTRG00000016725 ortholog_one2one 1 retrogene
retro_ttru_1895,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_93 76.74 71.43
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Download FASTA sequences of all ENSACAG00000001397 retrocopies