RetrogeneDB ID: | retro_etel_1965 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_320202:88181..88537(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | YPEL1 | ||
Ensembl ID: | ENSETEG00000008187 | ||
Aliases: | None | ||
Description: | yippee-like 1 (Drosophila) [Source:HGNC Symbol;Acc:12845] |
Percent Identity: | 82.79 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MVKMTKSKTFQAYLPNCHRTYSCLHCRA-HLANHDELISKAXSFQGSQGRAYLFNSVVNVGCGPAEERVL |
M...TKS.TFQAYLPNCHRTYSCLHCRA.HLA.HDELISK...FQG.QG.AYLF..VVNV.CGPAEERVL | |
Retrocopy | MAQVTKSQTFQAYLPNCHRTYSCLHCRA<HLAKHDELISKC--FQGCQGSAYLFSFVVNVSCGPAEERVL |
Parental | LTGLHAVSDIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWE |
.TGLHAVSDIYCENC.TTLGWKYEHAFESSQKY.EGK.I.ELAH.IKD.GWE | |
Retrocopy | ITGLHAVSDIYCENCQTTLGWKYEHAFESSQKY*EGKCINELAHRIKDKGWE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Anolis carolinensis | ENSACAG00000001397 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000015755 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000024482 | 1 retrocopy | |
Echinops telfairi | ENSETEG00000008187 | 1 retrocopy |
retro_etel_1965 ,
|
Pteropus vampyrus | ENSPVAG00000013638 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000016725 | 1 retrocopy |