Parental gene:

NFYC, ENSACAG00000012591

Aliases:None
Description:nuclear transcription factor Y, gamma [Source:HGNC Symbol;Acc:7806]
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL343308.1:221508..262619(+)


>ENSACAG00000012591
ATGTCCACGGACGGGGGCTTTCCGGGAGGCAGTAGCGATGCCCAGCAGTGCCTCCAATCTTTCTGGCCTCGGGTCATGGA
GGAGATTCGGAATTTGACAGTGAAAGACTTCAGAGTTCAAGAACTTCCATTGGCACGCATTAAGAAGATCATGAAACTAG
ATGAGGATGTGAAGATGATCAGTGCTGAAGCACCTGTTCTGTTTGCCAAGGCTGCTCAGATATTCATCACGGAATTGACA
TTACGGGCCTGGATTCACACAGAGGACAACAAGCGCAGGACCCTGCAGAGAAATGACATTGCTATGGCGATCACAAAGTT
TGACCAGTTTGACTTTCTCATTGATATTGTTCCAAGGGATGAACTTAAACCTCCCAAGCGACAGGAGGAGGTGCGCCAAG
CAGTGACCCCAGCAGAGCCTGTCCAGTATTACTTCACTTTGGCGCAGCAGCCGGCGGCCGTCCAGGTCCAGGGGCAGCAG
ACTGGGCAGCAGACAACCACATCCACGGCGACCATCCAGCCGGGGCAGATCATCATAGCCCAGCCTCAGCAAGGGCAGAC
CACTCCTGTGACCATGCAGGTGGGTGAAGGGCAGCAGGTCCAGATTGTCCAGGCCCAGCCACAAGGGCAGGCCCAGCCAG
CACAGAGCGGGAGTGGACAGACCATGCAAGTCATGCAGCAGATCATTACCAACACAGGCGAGATTCAACAAATACCGGTC
CAGCTCAATGCCGGTCAGCTGCAGTACATCCGCTTGGCCCAGCCTGTCTCCGGCACCCAGGTCGTCCAGGGCCAGATCCA
GACACTTGCTGCCAACACGCAACAGATTACACAGACGGAGGTTCAACAGGGACAACAGCAATTCAGCCAGTTTACAGACG
GACAGCAACTGTACCAGATCCAGCAAGTGACCATGCCTGCTGGCCAGGACATCACCCAACCCATGTTCATCCAGTCGGCC
AGTCAGGCAACAGACGGGCAGTCCCCACAAGTTACAGGAGACTGA

Library Parental gene expression (RPM)
SRP009831_adrenal 119 .24 RPM
SRP009831_brain 70 .87 RPM
SRP009831_dewlap 91 .97 RPM
SRP009831_embryo 85 .71 RPM
SRP009831_heart 113 .05 RPM
SRP009831_liver 39 .63 RPM
SRP009831_lung 70 .37 RPM
SRP009831_ovary 117 .83 RPM
SRP009831_skeletal_muscle 26 .81 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021943 ortholog_one2many 1 retrogene
retro_btau_1338,
Callithrix jacchus ENSCJAG00000002987 possible_ortholog 1 retrogene
retro_cjac_4050,
Homo sapiens ENSG00000066136 ortholog_one2one 2 retrogenes
retro_hsap_4280, retro_hsap_4668,
Gorilla gorilla ENSGGOG00000007360 ortholog_one2one 2 retrogenes
retro_ggor_2865, retro_ggor_2896,
Macropus eugenii ENSMEUG00000004480 ortholog_one2many 1 retrogene
retro_meug_1145,
Macaca mulatta ENSMMUG00000014970 ortholog_one2many 2 retrogenes
retro_mmul_1202, retro_mmul_2485,
Mus musculus ENSMUSG00000032897 ortholog_one2many 1 retrogene
retro_mmus_844,
Nomascus leucogenys ENSNLEG00000012195 possible_ortholog 2 retrogenes
retro_nleu_2369, retro_nleu_2850,
Otolemur garnettii ENSOGAG00000012614 ortholog_one2many 2 retrogenes
retro_ogar_2147, retro_ogar_411,
Pongo abelii ENSPPYG00000001483 ortholog_one2one 3 retrogenes
retro_pabe_1712, retro_pabe_3490, retro_pabe_3628,
Pan troglodytes ENSPTRG00000000596 ortholog_one2many 2 retrogenes
retro_ptro_2903, retro_ptro_3102,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_33 94.42 64.37
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Download FASTA sequences of all ENSACAG00000012591 retrocopies