Parental gene:

DSE, ENSACAG00000013791

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:1:186233248..186281507(-)


>ENSACAG00000013791
ATGAGGACTTACACACGGGGGGCTCCCAGTGTGTTTTTCATACATATGGTTTGCTTTGCACTGGTCTACACCACAGACGA
AATCCTGAGCACAGTGGTTCCCTTTGTCAATGCCAACTACGATAGCTACCCAATGCTCTACTTTTCCAGAGAGGATATTC
CGGATTTGCAGACTAAGGCCACCACTACACACCAGCACATTGCAGTGCGGTTAGTCGAAGCTGTGCAGATCATGCTATCA
AACCCATTGGAATACCTTCCTCCTTGGGACCCCAAGGACTTCAGCGCTCGATGGAATGAAATTTATGGCAACAACTTGGG
CGCCCTGGCAATGTTTTGTCTACTTTATCCAGAGAACATTGAAGCCGTTGACATGGCCAAAGATTACATGGAAAGAATGG
CAGCTCAGCCTAGTTGGTTAGTAAAAGATGCACCCTGGGATGAGGTCCCTCTTGCTCATTCTTTGGTTGGATTTGCCACT
GCTTATGACTTCTTGTACAACTATCTTAGCAAGTCTCAGCAGGAAAGATTTCTTGAGGTAATTGCCAATGCCTCAGGATA
TATGTATGAAGCATCGTATAGACGAGGATGGGGTTTCCAGTATCTACACAACCATCAGCCTACCAACTGTGTGGCCTTAT
TGGCAGGAAGTCTTATTTTAATGAATCAAGGTTATCTCCAGGAAGCATACCTGTGGACTAAGCAAGTCCTAGCAATCATG
GAGAAGTCTATAGTTCTGCTGCAAGAAGTGACAGATGGATCTCTGTATGAAGGAGTAGCTTATGGCAGTTATACCACCAG
ATCACTTTTCCAGTATATCTTCCTTGTCCAAAGGCACTTTGACATTAACCACTTTAACCATCCCTGGCTTAAACAACATT
TTGCTTTTATGTATAGGACAGTTCTGCCAGGATTCCAAAGGACAGTTGCTATTGCAGATTCCAACTACAACTGGTTTTAT
GGACCAGAGAGCCAGCTGGTATTTCTAGACAAGTTTATTATGCGCAATGGCAGTGGAAATTGGTTGGCTGATCAGATCAG
AAGGAACAGAGTTCTTGAAGGCCCAGGAACCCCATCGAAAGGGCAGCGATGGTGCACTCTGCATACTGAATTTATCTGGT
ATGATGCCAGCCTGGGTTTTGTACCTCCACCAGACTACGGTATTCCAAAACTGCATTATTTTGAGGACTGGGGAGTTGTA
ACATATGGAAGTGCATTGCCAGCTGAAATCAACAGACCCTTCCTCTCCTTCAAATCAGGAAAGCTTGGAGGCCGTGCAAT
ATATGATATTGTTCACAGGAACAAATACAAAGACTGGATCAAAGGCTGGCGGAACTTCAATGCTGGCCATGAACACCCAG
ATCAGAACTCCTTTACTTTTGCACCTAATGGTGTACCCTTTATAACAGAAGCTCTGTATGGCCCAAAGTACACATTTTTA
AACAATGTTCTGATGTTTTCTCCAGCTGTATCAAAGAGCTGCTTCTACCCATGGGAAGGTCAAGTTACAGAAGACTGCTC
ATCAAAGTGGTTGAAGTACAAACACGACTTGGCTGCAGACTGTCAGGGGAGAGTGGTTGCTGCTATGGAAAGAAGTGGGA
TCATCTTTATCAGGGGTGAAGGGGTGGGTGCCTACAACCCCAAACTAAAATTGAAAAGCCTCCAAAGAAACCTTTTCCTA
ATACACCCTCAGCTGCTTTTGTTAGTAGACCAAATACATCTCGCTGATGATAGCCCTCTGGAAATGGCAACCAGCTTTTT
CCACAATGTGGATGTGCCTTTTGAAGAAACTGTGATTGATAATGTCCATGGGGCCTTTATTAGGCAACAAGATGGGCTAT
ACAAGATGTATTGGATGGATGACACGGGCTATAGTGAAAAAGCTGTTGTCACCTCAAGAATGTATCCCAGAGGGTATCCT
TACAATGGAACTAATTACGTGAATGTCACAACTCACCTACGTAAACCCGTCACTAGCGCTGTGTACCTCTTCATTGGACC
TTCCGTTGATGTCCAGAGCTTCAGTGTTCATGGAGATGCTCAGCAGTTGAATGTTTTCATTACCACTGGTGAGCATGCCT
ACGCTATCTATTTGTGGACTGGAGAGGATAGAAGCCACTCTGTCTTTGCACAAGTTATTGCAGATCGCCAGAAGGTTCTG
TTTGACAGAGCTGCTTCCATTAGAAGTTCCCTGGTATCAGAAGTAAGAGACTATGCTGCAGTCGTTGAGCAGAGCCTTCA
GCATTTCAAGCCAGTCTTCCAGCAGCTGGAGAAACAGATTTTGTCCCGAGTGCGGAATACAGACAGTTTCAGAAAGACCG
CCGAGCGCCTGCTGAGGTTTTCAGATAAGAGACAGACAGAGGAGGCCATTGACAGGATATTTGCAATTTCTCAACAACAG
CAACAGCAAGGCAGAGCAAAGAAGAATAAAAAAGTGGCCAAAGGCTATAAGTTTATTGATACTGGCCCAGACATTTTTGC
ACAGATTGAAGTCAATGAAAGGAAAGTTCGGCAGAAGGCACAGACTTTGGCTCAGAAAGAACTACATGTAGATGAAGATG
AGGAAATGAAAGATCTTCTGGATTTTGAAGACGATATATATGGGAAACACAAAAACAGTGTGTCCATCAAAGGCCGATCA
GGTCTTTCACACATGTTGGCAACTGCTCGAAGTAGTGCTCCTTCAGTGTCAGCATCTTATACCCGCCTTTTTCTCATTCT
GAACATTGTGATTTTCTTTATCATGCTAGCAATGCAAGTCACTTGGTTCCACAGAACCAAGAGCCTCCATGGCCAAAGAT
GTCTATATGCAATCTTGCTAGCTGACAGCTGCATATTACTGTGGTTGTATTCTTCTTGTTCCCAGTCACAGTGCTAG

Library Parental gene expression (RPM)
SRP009831_adrenal 82 .91 RPM
SRP009831_brain 10 .46 RPM
SRP009831_dewlap 4 .77 RPM
SRP009831_embryo 107 .14 RPM
SRP009831_heart 16 .24 RPM
SRP009831_liver 12 .31 RPM
SRP009831_lung 38 .54 RPM
SRP009831_ovary 2 .16 RPM
SRP009831_skeletal_muscle 5 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004530 ortholog_one2one 1 retrogene
retro_cjac_1174,
Homo sapiens ENSG00000111817 ortholog_one2one 1 retrogene
retro_hsap_4178,
Gorilla gorilla ENSGGOG00000026746 ortholog_one2one 2 retrogenes
retro_ggor_1419, retro_ggor_2802,
Nomascus leucogenys ENSNLEG00000013106 ortholog_one2one 1 retrogene
retro_nleu_2476,
Pongo abelii ENSPPYG00000016948 ortholog_one2one 2 retrogenes
retro_pabe_3418, retro_pabe_3517,
Pan troglodytes ENSPTRG00000018529 ortholog_one2one 1 retrogene
retro_ptro_2833,
Sorex araneus ENSSARG00000010799 ortholog_one2one 1 retrogene
retro_sara_560,
Takifugu rubripes ENSTRUG00000006239 ortholog_one2one 1 retrogene
retro_trub_32,
Xenopus tropicalis ENSXETG00000032776 ortholog_one2one 1 retrogene
retro_xtro_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_15 51.56 66.70
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Download FASTA sequences of all ENSACAG00000013791 retrocopies