Parental gene:

DSE, ENSPTRG00000018529

Aliases:DSE, SART2
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:6:117406618..117565300(+)


>ENSPTRG00000018529
ATGAGGACTCACACACGGGGGGCTCCCAGTGTGTTTTTCATATATTTGCTTTGCTTTGTGTCAGCCTACATCACCGACGA
GAACCCAGAAGTTATGATTCCCTTCACCAATGCCAACTACGACAGCCATCCCATGCTGTACTTCTCCAGGGCAGAAGTGG
CGGAGCTGCAGCGCAGGGCTGCCAGCTCGCACGAGCACATTGCAGCCCGCCTCACGGAGGCTGTGCACACGATGCTGTCC
AGCCCCTTGGAATACCTCCCTCCCTGGGATCCCAAGGACTACAGTGCCCGCTGGAATGAAATTTTTGGAAACAACTTGGG
TGCCTTGGCAATGTTCTGTGTGCTGTATCCTGAGAACATTGAAGCCCGAGACATGGCCAAAGACTACATGGAGAGGATGG
CAGCGCAGCCTAGTTGGTTGGTGAAAGATGCTCCTTGGGATGAGGTCCCGCTTGCTCACTCCCTGGTTGGTTTTGCCACT
GCTTATGACTTCTTGTACAACTACCTGAGCAAGACACAACAGGAGAAGTTTCTTGAAGTGATTGCCAATGCCTCAGGGTA
TATGTATGAAACTTCATACAGGAGAGGATGGGGATTTCAATACCTGCACAATCATCAGCCCACCAACTGTATGGCTTTGC
TCACAGGAAGCCTAGTCCTGATGAATCAAGGATATCTTCAAGAAGCGTACTTATGGACCAAACAAGTTCTGACCATCATG
GAGAAATCTCTGGTCTTGCTCAGGGAGGTGACGGATGGCTCCCTCTATGAAGGAGTTGCGTATGGCAGCTACACCACTAG
ATCACTCTTCCAGTACATGTTTCTCGTCCAGAGGCACTTCAACATCAACCACTTTGGCCATCCGTGGCTTAAACAACACT
TTGCATTTATGTATAGAACCATCCTGCCAGGGTTTCAAAGGACTGTGGCTATTGCGGACTCAAATTACAACTGGTTTTAT
GGTCCAGAAAGCCAATTAGTGTTCCTTGATAAATTTGTCATGCGTAATGGCAGTGCTAACTGGCTAGCTGACCAAATCAG
AAGGAACCGTGTGGTGGAAGGTCCAGGAACACCATCCAAAGGGCAGCGCTGGTGCACTCTGCACACGGAATTTCTCTGGT
ATGATGCCAGCTTGAAATCGGTTCCTCCTCCAGACTTTGGCACCCCTACACTGCATTATTTTGAAGACTGGGGTGTCGTG
ACTTATGGAAGTGCACTACCTGCAGAAATCAATAGATCTTTCCTTTCCTTCAAGTCTGGAAAACTGGGGGGACGTGCAAT
ATATGACATTGTCCACAGAAACAAGTACAAAGATTGGATCAAAGGATGGAGAAATTTTAATGCAGGGCATGAACATCCTG
ATCAAAACTCATTTACTTTTGCTCCCAATGGTGTGCCTTTCATTACTGAGGCTCTGTATGGGCCAAAGTACACCTTCTTC
AACAATGTTTTGATGTTTTCCCCAGCTGTTTCAAAGAGCTGCTTTTCTCCCTGGGTGGGTCAGGTCACAGAAGACTGCTC
ATCAAAATGGTCTAAATACAAGCATGACCTGGCAGCTAGTTGTCAGGGGAGGGTGGTTGCAGCAGAGGAGAAAAATGGGG
TGGTTTTCATCCGAGGAGAAGGTGTGGGAGCTTATAACCCCCAGCTCAACCTGAAGAATGTTCAGAGGAATCTCATCCTC
CTACATCCACAGCTGCTTCTCCTTGTAGACCAAATACACCTGGGAGAGGAGAGTCCCTTGGAGACAGCAGCGAGCTTCTT
CCATAATGTGGATGTTCCTTTTGAGGAGACTGTGGTAGATGGTGTCCATGGGGCTTTCATCAGGCAGAGAGATGGTCTCT
ATAAAATGTACTGGATGGACGATACTGGCTACAGCAAGAAAGCAACCTTTGCCTCAGTGACATATCCTCGGGGCTATCCC
TACAACGGGACAAACTATGTGAATGTCACCATGCACCTCCGAAGTCCCATCACCAGGGCAGCTTACCTCTTCATAGGGCC
ATCTATAGATGTTCAGAGCTTCACTGTCCACGGAGACTCTCAGCAACTGGATGTGTTCATAGCCACCAGCAAACATGCCT
ACGCCACATACCTGTGGACAGGTGAGGCCACAGGACAGTCCGCCTTTGCACAGGTCATTGCTGATCATCACAAAATTCTG
TTTGACCGGAATTCAGTCATCAAGAGCAGCATTGTCCCTGAGGTGAAGGACTATGCTGCTATTGTGGAACAGAACTTGCA
GCATTTTAAACCAGTGTTTCAGCTGCTGGAGAAGCAGATACTGTCCCGAGTCCGGAACACAGCTAGCTTTAGGAAGACTG
CTGAACGCCTGCTGAGATTTTCAGATAAGAGACAGACTGAGGAGGCCATTGACAGGATTTTTGCCATATCACAGCAACAG
CAGCAGCAAAGCAAGTCAAAGAAAAACCGAAGGGCAGGCAAACGCTATAAATTTGTGGATGCTGTCCCTGATATTTTTGC
ACAGATTGAAGTCAATGAGAAAAAGATTAGACAGAAAGCTCAGATTTTGGCACAGAAAGAACTACCCATAGATGAAGATG
AAGAAATGAAAGACCTTTTAGATTTTGCAGATGTAACATACGAGAAACATAAAAATGGGGGCTTGATTAAAGGCCGGTTT
GGACAGGCACGGATGGTGACAGCTACACACAGCAGGGCCCCATCACTGTCTGCTTCCTATACCAGGTTGTTCCTGATTCT
GAACATTGCTATTTTCTTTGTCATGTTGGCAATGCAACTGACTTATTTCCAGAGGTCCCAGAGCCTACACGGCCAAAGAT
GTCTTTATGCAGTTCTTCTCATAGATAGCTGTATTTTATTATGGTTGTACTCTTCTTGTTCCCAATCACAGTGTTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .52 RPM
SRP007412_cerebellum 4 .66 RPM
SRP007412_heart 5 .57 RPM
SRP007412_kidney 8 .55 RPM
SRP007412_liver 9 .75 RPM
SRP007412_testis 24 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000013791 ortholog_one2one 1 retrogene
retro_acar_15,
Callithrix jacchus ENSCJAG00000004530 ortholog_one2one 1 retrogene
retro_cjac_1174,
Homo sapiens ENSG00000111817 ortholog_one2one 1 retrogene
retro_hsap_4178,
Gorilla gorilla ENSGGOG00000026746 ortholog_one2one 2 retrogenes
retro_ggor_1419, retro_ggor_2802,
Nomascus leucogenys ENSNLEG00000013106 ortholog_one2one 1 retrogene
retro_nleu_2476,
Pongo abelii ENSPPYG00000016948 ortholog_one2one 2 retrogenes
retro_pabe_3418, retro_pabe_3517,
Sorex araneus ENSSARG00000010799 ortholog_one2one 1 retrogene
retro_sara_560,
Takifugu rubripes ENSTRUG00000006239 ortholog_one2one 1 retrogene
retro_trub_32,
Xenopus tropicalis ENSXETG00000032776 ortholog_one2one 1 retrogene
retro_xtro_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2833 87.99 100.00
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Download FASTA sequences of all ENSPTRG00000018529 retrocopies