Parental gene:

ENSACAG00000024100

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL344054.1:71150..93824(-)


>ENSACAG00000024100
AGTAATCAGAAAGGGGAAAACAAGAATCAAGTATCAATATTAGAATTAAATGTACATAACACTGCTGACATGGAGAAGAA
AGCATATAAATGTATTGAATGTGGAAAGAGCTTTAGTTATAGTTCAACTCTACAAACACATAAAAGGACTCACACTGGGG
AGAAACCCTTTACATGCCTGGAGTGTGGACAGAGCTTTACTCAGAAGGGAAGCTTACAAACACATCAAAGGACTCACACT
GGGGAGAAACCCTATAAGTGCTGTGAGTGTGGACAGAGCTTCATTCATAGTTCAAGTCTCCGTGTACATCAAAGGACTCA
CACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCACTCATAGTTCATATCTACGTAAACATCACAGGA
TTCACATTGGGGAGAAACCCTATAAATGCCTTGAGTGTGGACAGAGTTTTACTCTGAAGGGAAGCTTACAAACACATCAA
AGAACTCACACTGGTGAGAAACCCTATAAATGCCTGGAGTGTGAACAGAGCTTCACTCATAGTTCAGGCCTACGTTCACA
TCAAAGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGAACAGAGCTTCACTCAGAGTTCAGGTCTACATA
GACATCATAGGACTCACACTAGGGAGAAACCCTATAAATGCCTAGAGTGTGAACAGAGCTTCACTTGTAGTTCAGGTCTA
CGTGTACATCAAAGGACTCACACTGGGGAGAAACCCTTTAAATGCCTGGAGTGTGAACAGAGCTTCACTCAGAGTTCAGG
TCTACATTCACATCAAAGGACTCACACTGGGGAGAAACCCTTTAAATGCCTGGAGTGTGGACAGAGCTTTGCTCATAATG
GAAGTCTGCATTCACATCAAAGGACTCACACTGGGGAGAAACCCTATAAATGCGTGGAGTGTGGACAGAGCTTCACTCAG
AATTCAGGCCTACGTACACATCAAAGGACTCACACTGGGGAGAAACCCTATAACTGCCTGCAGTGTGGACAGAGCTTCAC
TCATCGTTCAGGCTTACGTAGACATCAAAGGATTCACACTGGGGAGAAACCCTATACATGCCTGGAGTGTGGACAGAGCT
TCTCTCGTAGTTCAGGCCTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCCTTTAAATGCCTGGAGTGTGAACAG
AGCTTCACTCATCGTTCAGGCTTACGTAGACATCAAAGGATTCACACTGGGGAGAAACCCTATACATGCCTGGAGTGTGG
ACAGAGCTTCACTCATAGTTCAGGCCTACGTTCCCATCAAAGGATTCACACTGGGGAGAAACAATATAAATGCTTGGAGT
GTGGACAGAGCTTCACTCATAGTTCAGGCCTACGTTCACATCAAAGGACTCACACTGGGGAGAAACAATATAAATGCTTG
GAGTGTGGACAGAGCTTCACTCATAGTTCAGGCCTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCCTATAAATG
CCTGGAATGTGGACAGAGCTTTGCTCAGAGTGGAACGTTACATTCACATCAAAGGAGTCACACTGGGGAGAAACCCTATA
AATGCTTGGAGTGTGGACAGAGCTTCACTCATAGTTCAGGCCTACGTAGACATCAAAGGACTCACACTGGGGAGAAACCC
TATAAATGCCTGGAGTGTGTATTTGTGTTTGGTTACAATTCAGGCCTACGTACACATCAGAGGACTCACACTGGGGAGAA
ACCCTTTGAATGTCTGGAGTGCGGACAGAGTTTCACTCATAGTTCAGGCCTACGTTCACATCAAAGGACTCACACTGGGG
AGAAACCCTACAAATGCCTGGAGTGTGGACAGAGCTTCACTCATAGTTCAGTTTTGCGTTCACATCAAAGGACTCACACT
GGGGAGAAACCCTATAAGTGCCTGGAGTGTGGACAGAGCTTTACTCAGAAGGGACACTTACATTCCCATCAAAGGACTCA
CACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTCACTCAGAATTCAGGCCTACGTACACATCAAAGGA
CTCACACTGGGGAGGAACCCTATACATGCCTGGAGTGTGGACAGAGCTTCACTCAGAATTCAGGCCTATGTAGACATCAA
AGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGTGGACAGAGCTTGACTCGTAGTTCAGGCCTACGTTCCCA
TCAAAGGACTCACACTGGGGAGAAACCCTATAAATGCCTGGAGTGCGGGCAGAGCTTCACTCGTGGTTCAGGCCTACGTT
CCCATCAAAGGACTCACACTGGAGAGAAACCCTATAAATGTCTGGAGTGTGGACAGAGCTTCACTCATAGTTCAGGCCTA
CGTTCACATCAAAGGACTCACACTGGGGAGAAAGTCTATACATGCCTGGAGTGTGGACAGAGCTTCACTTATAGTTCAAA
TCTATGTAAACATCAAAGGACTCACACTGGGGAGAAACCTTATAAATGCCTGGAGTGTGGACAGAGCTTTGCTCAGAGTG
GAACTTTACGTTCACATCAAAGGACTCACACTGGGGGGGAGAAACCCTATAACTGCCTGGAGTGTGGACAGAGTTTCACT
CAGAGTTCAGGCCTACGTTCACATCAAAGGACTCACACTGGGGAGAAACCCTGTAAATGCTTGGAGTGTGAACAGAGC

Library Parental gene expression (RPM)
SRP009831_adrenal 5 .19 RPM
SRP009831_brain 3 .69 RPM
SRP009831_dewlap 12 .07 RPM
SRP009831_embryo 5 .63 RPM
SRP009831_heart 5 .03 RPM
SRP009831_liver 1 .06 RPM
SRP009831_lung 2 .62 RPM
SRP009831_ovary 14 .13 RPM
SRP009831_skeletal_muscle 0 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000022348 within_species_paralog 1 retrogene
Anolis carolinensis ENSACAG00000024147 within_species_paralog 1 retrogene
Danio rerio ENSDARG00000089344 possible_ortholog 1 retrogene
Xenopus tropicalis ENSXETG00000024377 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_28 82.64 58.50
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Download FASTA sequences of all ENSACAG00000024100 retrocopies