Parental gene: | CDCA8, ENSACAG00000028556 |
| Aliases: | None |
| Description: | cell division cycle associated 8 [Source:HGNC Symbol;Acc:14629] |
| Organism: | Anole lizard (Anolis carolinensis) |
| Coordinates: | GL344018.1:104304..118500(+) |
>ENSACAG00000028556
ATGGCTCCTTCAAAGAAGAAACGGTCAAAGGCACAGAGCAAAAATTCCCTCAGGGACAAACAGATCGATGCTTTCATTGA
GTCCTTTGACCAAGAAGTCAAAAGACGCGTTGAGAAACTCAGGGCGGACCTTAAGAACGTGCAGGAGAATATAAGCACCA
TGTTCGACCGGGAGATCCTGCGCCTGCCCACCGCCCTCAGAGAGATGAACTGGATCAGCTACTGCGCCCTCGGAGAAGAC
CCGGCAGTCCTAGAGCAGCTTGCCTTGGAGGGAACGGACGTCCAGGAAATCAACGAGATGGCCTCCAAGGCTTTGCGGAC
CCCCGTCCGAACTGTCCGGAAAGCTGCAAAGGCCAAGCTGCCCATCGAGAGCATTGAGGAGGAGGAGGAGGGCCCCATCC
TGCCCTTGAGGAAGAGGTCCCGGCAGGAGGACGAGGCCCCGATCCCCCTCCCTCCGGAGCAGAAGCCGCTCACGGGAAAG
CGGTCGACACGGAAGCCCCCCACGGCCAGGAAGTGCCGCCCACCCTCCTCCCGCCTGAACCAAAGCAGGGCCAGCAAAGG
CAAGCTGACCACGCCGGTGTCGTCCAACGGACGCAGTGCTGCCATCACCACCCCGGGTTTCGCCCCCAGGTTTGATTCCA
GCATCTTCAAGACCCCCGGGCTGCGGGCCCCCGCCTCCCACGAACCCGTCTTCAGCGTCTCCGCCAACGGCAGCCCCTTG
GCCGGCAGCAGCGATGTCTTTGTCACTCTTCCCATCGGCAAAGGGGAGAGCATCCGTGTCAAGGCCAGCGACCTCACGGA
GAAGGACCTCCTGCGCCTGAACCCGTCTGCTCTCGGGAGCATGAAGAAGCTCTCGGCCCAGGTCCTGCGCTTGTGCAAGT
AA
ATGGCTCCTTCAAAGAAGAAACGGTCAAAGGCACAGAGCAAAAATTCCCTCAGGGACAAACAGATCGATGCTTTCATTGA
GTCCTTTGACCAAGAAGTCAAAAGACGCGTTGAGAAACTCAGGGCGGACCTTAAGAACGTGCAGGAGAATATAAGCACCA
TGTTCGACCGGGAGATCCTGCGCCTGCCCACCGCCCTCAGAGAGATGAACTGGATCAGCTACTGCGCCCTCGGAGAAGAC
CCGGCAGTCCTAGAGCAGCTTGCCTTGGAGGGAACGGACGTCCAGGAAATCAACGAGATGGCCTCCAAGGCTTTGCGGAC
CCCCGTCCGAACTGTCCGGAAAGCTGCAAAGGCCAAGCTGCCCATCGAGAGCATTGAGGAGGAGGAGGAGGGCCCCATCC
TGCCCTTGAGGAAGAGGTCCCGGCAGGAGGACGAGGCCCCGATCCCCCTCCCTCCGGAGCAGAAGCCGCTCACGGGAAAG
CGGTCGACACGGAAGCCCCCCACGGCCAGGAAGTGCCGCCCACCCTCCTCCCGCCTGAACCAAAGCAGGGCCAGCAAAGG
CAAGCTGACCACGCCGGTGTCGTCCAACGGACGCAGTGCTGCCATCACCACCCCGGGTTTCGCCCCCAGGTTTGATTCCA
GCATCTTCAAGACCCCCGGGCTGCGGGCCCCCGCCTCCCACGAACCCGTCTTCAGCGTCTCCGCCAACGGCAGCCCCTTG
GCCGGCAGCAGCGATGTCTTTGTCACTCTTCCCATCGGCAAAGGGGAGAGCATCCGTGTCAAGGCCAGCGACCTCACGGA
GAAGGACCTCCTGCGCCTGAACCCGTCTGCTCTCGGGAGCATGAAGAAGCTCTCGGCCCAGGTCCTGCGCTTGTGCAAGT
AA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP009831_adrenal | 2 .00 RPM |
| SRP009831_brain | 0 .33 RPM |
| SRP009831_dewlap | 10 .59 RPM |
| SRP009831_embryo | 79 .52 RPM |
| SRP009831_heart | 0 .93 RPM |
| SRP009831_liver | 4 .50 RPM |
| SRP009831_lung | 1 .96 RPM |
| SRP009831_ovary | 31 .85 RPM |
| SRP009831_skeletal_muscle | 0 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004959 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002008 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000134690 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000007719 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000011926 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000014340 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000011630 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000001526 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000000552 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_acar_139 | 63.31 | 54.95 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_acar_200 | 65.19 | 53.24 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSACAG00000028556 retrocopies