Parental gene:

RBMS2, ENSAMEG00000004054

Aliases:None
Description:RNA binding motif, single stranded interacting protein 2 [Source:HGNC Symbol;Acc:9909]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192457.1:545693..599087(+)


>ENSAMEG00000004054
ATGCTGCTATCAGTGACTTCCAGGCCTGGGATTTCGACTTTTGGCTATAACAAGAACAACAAGAAGCCATATGTGTCATT
GTCTCAGCAGATGGCACCACCAAGTCCGAGCAACAGTACCCCGAACAGCAGCAATGGGAGCAATGGAAACGACCAGTTGA
GCAAAACCAACCTCTATATTCGGGGATTGCAACCAGGCACTACTGACCAGGACCTTGTCAAACTGTGCCAGTCATATGGC
AAGATTGTCTCTACTAAGGCCATATTGGACAAGAGCACGAACAAATGCAAAGGCTATGGCTTTGTGGACTTTGACAGTCC
TTCAGCCGCACAGAAAGCTGTCACGGCACTGAAAGCCAGTGGTGTACAGGCACAGATGGCAAAGCAACAGGAGCAGGACC
CCACAAACTTATACATATCAAACCTTCCATTATCAATGGACGAGCAAGAACTGGAGGGGATGCTGAAGCCCTTTGGCCAG
GTTATCTCCACTCGAATCCTCCGAGACACCAGAGGGACCAGCAGAGGGGTTGGCTTTGCAAGGATGGAGTCCACAGAGAA
GTGTGAAGCCATCATCACCCACTTTAATGGAAAATATATTAAGACACCTGCTGGAGTACCAGCCCCATCTGATCCCTTGC
TTTGCAAGTTTGCTGATGGTGGTCCAAAGAAACGACAGAATCAAGGGAAATATATGCAAAATGGACGGGCCTGGCCAAGG
AATGGAGATATGGGTGGTATGGCCTTGACCTATGACCCCACCACAGCTCTTCAGAATGGGTTTTACCCGGCTCCTTACAA
CATGACCCCCAACAGGATGCTTGCTCAGTCTGCACTCTCCCCGTACCTTCCATCTCCTGTGTCCTCCTATCAGAGAGTAA
CTCAGACGTCTCCTCTCCAAGTGCCTAACCCGTCTTGGACGCACCACCCGTCCTACCTCATGCAGCCTTCGGGTTCCGTG
CTGCCGCCAGGGATGGATCACCCCCTTTCTCTGCAGCCGGCCTCCATGATGGGACCTCTTACCCAGCAACTGGGGCACCT
CTCCCTCAGCAGCACAGGCACGTACGTGCCGGCGGCCGCCCCCGTGCCGGGAGCTTACATCTCCCCGTACACCCCCGTGC
CTTCTTCCGGTGTTGCGGCCGAGGAGAGCAGCGGCCCGCAGACTCAGGTGCCGGTGGACGCCCCCTCGGACCACGGGCTC
TACTCGTTCCAGTTCAGCAAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000348 other_paralog 1 retrogene
retro_amel_1650,
Ailuropoda melanoleuca ENSAMEG00000011535 other_paralog 2 retrogenes
retro_amel_107, retro_amel_676,
Callithrix jacchus ENSCJAG00000010803 ortholog_one2one 1 retrogene
retro_cjac_1022,
Homo sapiens ENSG00000076067 ortholog_one2one 1 retrogene
retro_hsap_1143,
Myotis lucifugus ENSMLUG00000000530 ortholog_one2one 1 retrogene
retro_mluc_1093,
Mus musculus ENSMUSG00000040043 ortholog_one2one 1 retrogene
retro_mmus_1530,
Pan troglodytes ENSPTRG00000005104 ortholog_one2one 1 retrogene
retro_ptro_778,
Pteropus vampyrus ENSPVAG00000007616 ortholog_one2one 2 retrogenes
retro_pvam_1429, retro_pvam_695,
Rattus norvegicus ENSRNOG00000003076 ortholog_one2one 1 retrogene
retro_rnor_1374,
Sus scrofa ENSSSCG00000000402 ortholog_one2one 1 retrogene
retro_sscr_546,
Tursiops truncatus ENSTTRG00000002117 ortholog_one2one 1 retrogene
retro_ttru_715,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_454 73.79 99.75
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Download FASTA sequences of all ENSAMEG00000004054 retrocopies