Parental gene:

Rbms2, ENSMUSG00000040043

Aliases:Rbms2, 2610315E04Rik, Scr3
Description:RNA binding motif, single stranded interacting protein 2 [Source:MGI Symbol;Acc:MGI:1861776]
Organism:Mouse (Mus musculus)
Coordinates:10:128129469..128180297(-)


>ENSMUSG00000040043
ATGCTGCTATCAGTGACTTCCAGGCCTGGGATTTCGACTTTTGGCTATAACAAGAACAACAAGAAGCTATATGTGGCTCA
GCAAATGGCACCTCCAAGTCCAAGGAATAGCACCCCCAACAGCAGCGGCGGAGGCGGCGGCGGGAGTGGTGGGAACGACC
AGCTGAGCAAAACCAACCTGTATATCCGAGGACTGCAGCCAGGCACCACTGACCAGGACCTTGTCAAGCTCTGTCAGCCG
TATGGCAAGATTGTCTCCACTAAGGCCATCCTGGACAAGACCACAAACAAGTGCAAAGGCTATGGCTTTGTGGACTTCGA
CAGTCCGTCATCAGCACAGAAAGCTGTAACTGCACTGAAAGCCAGTGGTGTGCAGGCACAAATGGCAAAGCAACAGGAGC
AAGACCCTACAAACTTATACATCTCAAACCTCCCTCTGTCAATGGACGAGCAGGAACTGGAGGGGATGCTGAAGCCCTTT
GGCCAGGTCATCTCTACTCGGATCCTTCGAGACACTAGTGGGGCCAGCAGAGGGGTCGGCTTTGCAAGGATGGAGTCAAC
AGAGAAGTGTGAAGCCATCATCACCCACTTTAATGGAAAGTATATAAAGACACCCCCTGGAGTAGCAGCACCTTCTGACC
CTTTGCTTTGCAAATTTGCTGACGGTGGGCCAAAGAAACGACAGAGCCAAGGAAGATACGTGCAAAATGGACGGGCCTGG
CCAAGGAACGGAGACATGGGCGGTATGGCCTTGACCTATGACCCCACTGCTGCCCTTCAGAATGGGTTCTACGCAGCTCC
TTACAGTATCGCCCACAGCAGGATGCTTGCTCAATCTGCGCTAGCCCCGTATCTTCCATCTCCTGTGTCTTCCTATCAGG
GCTCAGTTCTGACACCAGGGATGGACCACCCCCTCTCTCTCCAGCCTGCCTCCATGATGGGACCTCTTACCCAGCAACTG
GGTCACCTGTCACTCAACAGTCTGGGCACGTTCATGCCGGCAGCTGCTGCTATGCATGGGGCTTACATCTCCCAGTACCC
AGCTGTGCCTTCTTCCAGTGTTTCTGCTGAGGAGAGCAATGGCCAGCAGAATCAACTGGCAGTGGAGCCCCCCTCAGACC
ACGGGGTCTATCCTTTCCAGTTCAGCAAATAA

Library Parental gene expression (RPM)
SRP007412_brain 16 .42 RPM
SRP007412_cerebellum 31 .13 RPM
SRP007412_heart 136 .07 RPM
SRP007412_kidney 88 .49 RPM
SRP007412_liver 22 .28 RPM
SRP007412_testis 18 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004054 ortholog_one2one 1 retrogene
retro_amel_454,
Callithrix jacchus ENSCJAG00000010803 ortholog_one2one 1 retrogene
retro_cjac_1022,
Homo sapiens ENSG00000076067 ortholog_one2one 1 retrogene
retro_hsap_1143,
Myotis lucifugus ENSMLUG00000000530 ortholog_one2one 1 retrogene
retro_mluc_1093,
Mus musculus ENSMUSG00000011257 other_paralog 7 retrogenes
retro_mmus_2006, retro_mmus_2326, retro_mmus_2327, retro_mmus_798, retro_mmus_801, retro_mmus_803, retro_mmus_805,
Mus musculus ENSMUSG00000022283 other_paralog 2 retrogenes
retro_mmus_102, retro_mmus_2164,
Pan troglodytes ENSPTRG00000005104 ortholog_one2one 1 retrogene
retro_ptro_778,
Pteropus vampyrus ENSPVAG00000007616 ortholog_one2one 2 retrogenes
retro_pvam_1429, retro_pvam_695,
Rattus norvegicus ENSRNOG00000003076 ortholog_one2one 1 retrogene
retro_rnor_1374,
Sus scrofa ENSSSCG00000000402 ortholog_one2one 1 retrogene
retro_sscr_546,
Tursiops truncatus ENSTTRG00000002117 ortholog_one2one 1 retrogene
retro_ttru_715,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1530 90.65 63.97
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Download FASTA sequences of all ENSMUSG00000040043 retrocopies