RetrogeneDB - Parental gene ENSAMEG00000004684 details

                            
>ENSAMEG00000004684
ATGGCGCCGAAGCCTAAGAAGGAAGCCCCTGCCCCTCCCAAAGCCGAAGCCAAAGCAAAGGCTTTGAAGGCCAAGAAAGC

GGTGCTGAAAGGCGTCCACAGCCACAAAAAAAAGAAGATTCGCACGTCACCTACATTCCGACGACCCAAGACTCTGCGTC

TCCGAAGGCAGCCCAAATATCCTCGAAAGAGCGCCCCCAGGAGAAACAAGCTTGATCACTATGCCATCATCAAATTCCCC

CTGACTACTGAGTCAGCCATGAAGAAAATAGAAGACAACAACACACTTGTGTTCATTGTGGATGTCAAGGCCAACAAGCA

CCAGATCAAACAGGCTGTGAAGAAGCTCTATGATATTGATGTGGCCAAGGTCAACACCTTGATCAGGCCTGATGGAGAAA

AGAAGGCGTATGTTCGACTGGCTCCCGACTATGATGCTTTGGATGTTGCCAACAAAATTGGGATCATCTAA

Species	Parental gene accession	Homology type	Retrogenes number
Anolis carolinensis	ENSACAG00000005311	possible_ortholog	2 retrogenes	retro_acar_152, retro_acar_173,
Dasypus novemcinctus	ENSDNOG00000019487	possible_ortholog	65 retrogenes	retro_dnov_1018, retro_dnov_1065, retro_dnov_1069, retro_dnov_1082, retro_dnov_1169, retro_dnov_120, retro_dnov_123, retro_dnov_1238, retro_dnov_127, retro_dnov_1283, retro_dnov_1365, retro_dnov_1460, retro_dnov_1514, retro_dnov_1538, retro_dnov_1541, retro_dnov_1597, retro_dnov_171, retro_dnov_1781, retro_dnov_1793, retro_dnov_1816, retro_dnov_183, retro_dnov_1835, retro_dnov_1837, retro_dnov_1873, retro_dnov_1926, retro_dnov_203, retro_dnov_2046, retro_dnov_2051, retro_dnov_2089, retro_dnov_2178, retro_dnov_2256, retro_dnov_2278, retro_dnov_2284, retro_dnov_2343, retro_dnov_2368, retro_dnov_246, retro_dnov_2493, retro_dnov_2563, retro_dnov_2573, retro_dnov_267, retro_dnov_372, retro_dnov_401, retro_dnov_429, retro_dnov_470, retro_dnov_499, retro_dnov_556, retro_dnov_581, retro_dnov_591, retro_dnov_611, retro_dnov_625, retro_dnov_636, retro_dnov_64, retro_dnov_67, retro_dnov_683, retro_dnov_704, retro_dnov_718, retro_dnov_731, retro_dnov_736, retro_dnov_749, retro_dnov_769, retro_dnov_813, retro_dnov_832, retro_dnov_903, retro_dnov_929, retro_dnov_972,
Gorilla gorilla	ENSGGOG00000016736	possible_ortholog	26 retrogenes	retro_ggor_1027, retro_ggor_1028, retro_ggor_1123, retro_ggor_120, retro_ggor_123, retro_ggor_1284, retro_ggor_140, retro_ggor_1431, retro_ggor_158, retro_ggor_1650, retro_ggor_1743, retro_ggor_1789, retro_ggor_1911, retro_ggor_1948, retro_ggor_2164, retro_ggor_2239, retro_ggor_2285, retro_ggor_229, retro_ggor_2409, retro_ggor_2475, retro_ggor_2568, retro_ggor_2764, retro_ggor_2773, retro_ggor_580, retro_ggor_611, retro_ggor_642,
Loxodonta africana	ENSLAFG00000013387	possible_ortholog	16 retrogenes	retro_lafr_1176, retro_lafr_153, retro_lafr_237, retro_lafr_33, retro_lafr_335, retro_lafr_442, retro_lafr_510, retro_lafr_525, retro_lafr_551, retro_lafr_557, retro_lafr_643, retro_lafr_78, retro_lafr_891, retro_lafr_908, retro_lafr_957, retro_lafr_96,
Monodelphis domestica	ENSMODG00000019297	possible_ortholog	3 retrogenes	retro_mdom_120, retro_mdom_870, retro_mdom_912,
Nomascus leucogenys	ENSNLEG00000002872	possible_ortholog	60 retrogenes	retro_nleu_1004, retro_nleu_1216, retro_nleu_1273, retro_nleu_1290, retro_nleu_1398, retro_nleu_1448, retro_nleu_145, retro_nleu_1544, retro_nleu_158, retro_nleu_160, retro_nleu_161, retro_nleu_1775, retro_nleu_1782, retro_nleu_2004, retro_nleu_2010, retro_nleu_203, retro_nleu_211, retro_nleu_2115, retro_nleu_213, retro_nleu_2312, retro_nleu_2339, retro_nleu_2406, retro_nleu_2413, retro_nleu_2455, retro_nleu_2468, retro_nleu_2474, retro_nleu_2492, retro_nleu_2514, retro_nleu_2594, retro_nleu_2661, retro_nleu_2664, retro_nleu_2784, retro_nleu_2788, retro_nleu_2925, retro_nleu_2943, retro_nleu_2960, retro_nleu_2964, retro_nleu_3026, retro_nleu_3031, retro_nleu_3037, retro_nleu_3056, retro_nleu_3096, retro_nleu_3101, retro_nleu_3107, retro_nleu_3108, retro_nleu_3110, retro_nleu_3114, retro_nleu_3118, retro_nleu_3123, retro_nleu_3124, retro_nleu_328, retro_nleu_355, retro_nleu_356, retro_nleu_401, retro_nleu_473, retro_nleu_518, retro_nleu_641, retro_nleu_902, retro_nleu_938, retro_nleu_966,
Procavia capensis	ENSPCAG00000017002	possible_ortholog	30 retrogenes	retro_pcap_103, retro_pcap_122, retro_pcap_131, retro_pcap_187, retro_pcap_213, retro_pcap_215, retro_pcap_221, retro_pcap_233, retro_pcap_246, retro_pcap_279, retro_pcap_320, retro_pcap_321, retro_pcap_331, retro_pcap_336, retro_pcap_342, retro_pcap_347, retro_pcap_368, retro_pcap_372, retro_pcap_382, retro_pcap_390, retro_pcap_392, retro_pcap_396, retro_pcap_437, retro_pcap_450, retro_pcap_453, retro_pcap_460, retro_pcap_61, retro_pcap_70, retro_pcap_82, retro_pcap_96,
Pteropus vampyrus	ENSPVAG00000002922	possible_ortholog	32 retrogenes	retro_pvam_1002, retro_pvam_1004, retro_pvam_1083, retro_pvam_1113, retro_pvam_113, retro_pvam_1211, retro_pvam_1226, retro_pvam_1268, retro_pvam_1300, retro_pvam_1329, retro_pvam_1350, retro_pvam_1363, retro_pvam_1456, retro_pvam_159, retro_pvam_249, retro_pvam_385, retro_pvam_425, retro_pvam_436, retro_pvam_445, retro_pvam_511, retro_pvam_526, retro_pvam_537, retro_pvam_564, retro_pvam_593, retro_pvam_72, retro_pvam_729, retro_pvam_752, retro_pvam_840, retro_pvam_897, retro_pvam_927, retro_pvam_947, retro_pvam_95,
Sarcophilus harrisii	ENSSHAG00000014549	possible_ortholog	13 retrogenes	retro_shar_188, retro_shar_373, retro_shar_407, retro_shar_448, retro_shar_498, retro_shar_564, retro_shar_624, retro_shar_630, retro_shar_685, retro_shar_698, retro_shar_824, retro_shar_829, retro_shar_835,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_amel_75	77.66	60.26	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_amel_121	83.12	98.72	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_amel_288	87.97	99.36	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_amel_304	68.28	90.38	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_amel_323	78.48	100.00	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_amel_467	63.00	63.46	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_amel_479	75.16	100.00	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_amel_514	80.00	76.92	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_amel_667	73.25	100.00	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_amel_773	77.22	100.00	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_amel_843	83.90	75.00	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_amel_894	74.68	100.00	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_amel_901	75.16	100.00	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_amel_956	76.27	75.00	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_amel_1044	92.99	100.00	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_amel_1154	86.52	89.74	Please wait, loading	Please wait, loading	Please wait, loading
17.	retro_amel_1254	62.09	96.15	Please wait, loading	Please wait, loading	Please wait, loading
18.	retro_amel_1302	79.31	89.74	Please wait, loading	Please wait, loading	Please wait, loading
19.	retro_amel_1383	66.88	98.08	Please wait, loading	Please wait, loading	Please wait, loading
20.	retro_amel_1391	80.13	96.79	Please wait, loading	Please wait, loading	Please wait, loading
21.	retro_amel_1423	64.29	76.92	Please wait, loading	Please wait, loading	Please wait, loading
22.	retro_amel_1503	67.08	100.00	Please wait, loading	Please wait, loading	Please wait, loading
23.	retro_amel_1505	68.03	93.59	Please wait, loading	Please wait, loading	Please wait, loading
24.	retro_amel_1511	74.38	100.00	Please wait, loading	Please wait, loading	Please wait, loading
25.	retro_amel_1527	85.53	96.79	Please wait, loading	Please wait, loading	Please wait, loading
26.	retro_amel_1532	72.15	100.00	Please wait, loading	Please wait, loading	Please wait, loading
27.	retro_amel_1568	61.38	89.74	Please wait, loading	Please wait, loading	Please wait, loading
28.	retro_amel_1576	74.52	100.00	Please wait, loading	Please wait, loading	Please wait, loading
29.	retro_amel_1585	71.01	85.26	Please wait, loading	Please wait, loading	Please wait, loading
30.	retro_amel_1702	89.24	100.00	Please wait, loading	Please wait, loading	Please wait, loading
31.	retro_amel_1822	68.75	100.00	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSAMEG00000004684 retrocopies

Parental gene:	RPL23A, ENSAMEG00000004684
Aliases:	None
Description:	None
Organism:	*Panda (Ailuropoda melanoleuca)*
Coordinates:	GL192339.1:1976733..1980790(-)

Parental gene:

RPL23A, ENSAMEG00000004684