Parental gene: | ATP6V1C2, ENSBTAG00000001927 |
| Aliases: | None |
| Description: | V-type proton ATPase subunit C 2 [Source:RefSeq peptide;Acc:NP_001077122] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 11:86858115..86918106(-) |
>ENSBTAG00000001927
ATGTCCGAGTTTTGGTTAATTTCTGCCCCCAGAGATAAGGAAAATTTACAAGCCCTGGAGAGAATGAACACAGTAACCTC
CAAGTCTAACCTGTCTTATAACACCAAATTCACGATTCCTGACTTCAAGGTGGGGACCTTGGATTCCCTTGTCGGCCTCT
CTGATGAGTTGGCGAAGCTTGATGTCTTTGCTGAAAGTCTCATAAGGAGAATGGCCCAGAGCGTGGTGGAAGTGATGGAA
GACTCCAAGGGAAAGGTCCAGGAGAACCTTCTGGCCAACGGAGTTGACCTAACGTCCTTTGTGACCCACTTCGAATGGGA
CGTGGCCAAATATCCCGCCAAGCAGCCGCTGGTGAGCGTCGTGGACATTCTGGCAAAGCAACTGGCACAGATCGAGATAG
ACCTGAAGTCCCGAACAGCTGCCTACAACACTCTGAAGACAAACCTAGAAAATCTGGAGAAGAAATCCATGGGAAACCTC
TTCACTCGGACCCTGAGCGACATTGTGAGCAAAGAAGACTTCGTGCTGGATTCCGAGTACCTGATCACACTGCTGGTCAT
TGTCCCCAAGCCGAGTTACGTACAATGGCAAAAAACCTATGAATCCCTCTCAGACATGGTGGTCCCACGGTCAACCAAGT
TGATCGCTGAGGACAAGGAGGGCGGCCTCTTCACCGTGACTCTGTTTCGAAAAGTGATCGATGATTTCAAAACCAAAGCC
AAAGAGAATAAGTTCACTGTACGAGAATTTTACTATGATGAAAAAGAAATTAAAAGGGAAAGGGAAGAGATGACCCGATT
GTTGTCGGATAAGAAGCAACAATATCAAACTTCCTGTGTTGCTCTTAAAAAGGGATCATCCACCTTCCCGGACCACAAGG
TTAAGGTAACCCCGCTAGGGAACCCCGATAGGCCCGCTGCGGGGCAGAGCGACAGAGAGAGAGAGAATGAGGGCGAGGGT
GAGGGCCCGCTGCTGCGATGGCTCAAGGTCCACTTCAGCGAAGCCTTTGTTGCCTGGATCCACATCAAGGCACTGAGAGT
GTTTGTGGAGTCTGTGCTCAGGTATGGATTGCCAGTGAACTTCCAAGCGGTTCTCCTCCAGCCTCATAAGAAGTCATGCA
CCAAACGTTTACGACAGGTTCTGAACTCCGTCTTCAGGCATCTGGATGAAGTTGCAGCTGCAAGTATATTGGATGCATCC
GTGGAGATCCCTGGACTCCAACTCAGCAACCAAGACTACTTTCCTTACGTCTACTTCCACATCGACCTTAGTCTTCTCGA
CTAG
ATGTCCGAGTTTTGGTTAATTTCTGCCCCCAGAGATAAGGAAAATTTACAAGCCCTGGAGAGAATGAACACAGTAACCTC
CAAGTCTAACCTGTCTTATAACACCAAATTCACGATTCCTGACTTCAAGGTGGGGACCTTGGATTCCCTTGTCGGCCTCT
CTGATGAGTTGGCGAAGCTTGATGTCTTTGCTGAAAGTCTCATAAGGAGAATGGCCCAGAGCGTGGTGGAAGTGATGGAA
GACTCCAAGGGAAAGGTCCAGGAGAACCTTCTGGCCAACGGAGTTGACCTAACGTCCTTTGTGACCCACTTCGAATGGGA
CGTGGCCAAATATCCCGCCAAGCAGCCGCTGGTGAGCGTCGTGGACATTCTGGCAAAGCAACTGGCACAGATCGAGATAG
ACCTGAAGTCCCGAACAGCTGCCTACAACACTCTGAAGACAAACCTAGAAAATCTGGAGAAGAAATCCATGGGAAACCTC
TTCACTCGGACCCTGAGCGACATTGTGAGCAAAGAAGACTTCGTGCTGGATTCCGAGTACCTGATCACACTGCTGGTCAT
TGTCCCCAAGCCGAGTTACGTACAATGGCAAAAAACCTATGAATCCCTCTCAGACATGGTGGTCCCACGGTCAACCAAGT
TGATCGCTGAGGACAAGGAGGGCGGCCTCTTCACCGTGACTCTGTTTCGAAAAGTGATCGATGATTTCAAAACCAAAGCC
AAAGAGAATAAGTTCACTGTACGAGAATTTTACTATGATGAAAAAGAAATTAAAAGGGAAAGGGAAGAGATGACCCGATT
GTTGTCGGATAAGAAGCAACAATATCAAACTTCCTGTGTTGCTCTTAAAAAGGGATCATCCACCTTCCCGGACCACAAGG
TTAAGGTAACCCCGCTAGGGAACCCCGATAGGCCCGCTGCGGGGCAGAGCGACAGAGAGAGAGAGAATGAGGGCGAGGGT
GAGGGCCCGCTGCTGCGATGGCTCAAGGTCCACTTCAGCGAAGCCTTTGTTGCCTGGATCCACATCAAGGCACTGAGAGT
GTTTGTGGAGTCTGTGCTCAGGTATGGATTGCCAGTGAACTTCCAAGCGGTTCTCCTCCAGCCTCATAAGAAGTCATGCA
CCAAACGTTTACGACAGGTTCTGAACTCCGTCTTCAGGCATCTGGATGAAGTTGCAGCTGCAAGTATATTGGATGCATCC
GTGGAGATCCCTGGACTCCAACTCAGCAACCAAGACTACTTTCCTTACGTCTACTTCCACATCGACCTTAGTCTTCTCGA
CTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 1 .10 RPM |
| SRP017611_kidney | 25 .72 RPM |
| SRP017611_liver | 29 .52 RPM |
| ERP005899_muscle | 1 .48 RPM |
| ERP005899_liver | 1 .23 RPM |
| SRP030211_testis | 5 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006660 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000014803 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009748 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000009886 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1823 | 92.34 | 51.99 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000001927 retrocopies