Parental gene: | ATP6V1C2, ENSMODG00000014803 |
| Aliases: | None |
| Description: | ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2 [Source:HGNC Symbol;Acc:18264] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:527860352..527923188(-) |
>ENSMODG00000014803
ATGTCTTCGGAATTTTGGTTAATTTCTGCCCCTGGAGATAAGGAGAATTTGCAGGCTCTGGAACGGATGAACACAGTAAC
CTCCAAGTCAAATCTGTCTCACAACACCAAATTTGCCATTCCTGATTTCAAGGTGGGCACCTTGGATTCTCTTGTTGGTC
TCTCAGATGAGTTGGGGAAGCTTGATAGCTTCGCTGAAAGCCTTATAAAGAAGATGGCTCAGTGCGTAGTAGAAGTGATG
GAAGATGCCAAGGGCAGAGTTCATGAGAACCTGTTGGCCAATGGAGTTGACTTAACATCCTTTGTGACCCGCTTTGAATG
GGACATGGCCAAGTATCCTGCCAAGCAGCCTCTTGTGGTCGTAGTGGACACACTAGAAAAGCAACTGGCACAAATCGAAA
CAGACCTGAAAACCCGAACGGCTGCCTACAACACACTGAAAGGAAACCTGGAGAATCTGGAAAGGAAATCCTCAGGAAAC
CTCTTAACTCGGACGTTAGCAGATATTGTGAACAAAGAAGATTTCGTGCTAGATTCAGAGTATCTCGTCACTCTCGTGGT
GATAGTTCAAAAGCCAAACTATTCACAGTGGCAAAAAACGTATGAATCCCTCTCAGACATGGTGGTTCCTCGGTCAACCA
AACTGATTGCTGAAGATAATGAGGGAGGCCTCTTTACAGTCACGCTGTTTCGGAGAGTGATCGATGATTTCAAAGTCAAA
GCTAGAGAAAAGAAGTTCATTGTCCGTGAATTTTTCTATGATGAAAAAGAAATTAAAACTGAAAGGGAAGAGATGACTAA
ATTGCTTTCTGAAAAGAAGCAACAGTATGGTCCCCTTTTGCGCTGGCTGAAGGTGAACTTCAGCGAATCGTTTATTGCCT
GGATTCACATAAAGGCTTTGAGAGTATTTGTTGAATCGGTGCTAAGGTATGGACTACCCGTGAATTTTCAGGCAGTGCTT
TTACAGCCCCACAAGAAGGCCACCACCAAGCGGCTAAGAGAGGTTCTAAACTCAGTCTTCAAACACCTGGATGAAGTAGC
GGCAGCAAGTATATTGGATGCTTCTGTGGATATTCCTGGATTACAACTAAATAACCAAGACTATTTTCCTTATGTCTACT
TTCACATTGACCTGAGTCTTCTTGACTAG
ATGTCTTCGGAATTTTGGTTAATTTCTGCCCCTGGAGATAAGGAGAATTTGCAGGCTCTGGAACGGATGAACACAGTAAC
CTCCAAGTCAAATCTGTCTCACAACACCAAATTTGCCATTCCTGATTTCAAGGTGGGCACCTTGGATTCTCTTGTTGGTC
TCTCAGATGAGTTGGGGAAGCTTGATAGCTTCGCTGAAAGCCTTATAAAGAAGATGGCTCAGTGCGTAGTAGAAGTGATG
GAAGATGCCAAGGGCAGAGTTCATGAGAACCTGTTGGCCAATGGAGTTGACTTAACATCCTTTGTGACCCGCTTTGAATG
GGACATGGCCAAGTATCCTGCCAAGCAGCCTCTTGTGGTCGTAGTGGACACACTAGAAAAGCAACTGGCACAAATCGAAA
CAGACCTGAAAACCCGAACGGCTGCCTACAACACACTGAAAGGAAACCTGGAGAATCTGGAAAGGAAATCCTCAGGAAAC
CTCTTAACTCGGACGTTAGCAGATATTGTGAACAAAGAAGATTTCGTGCTAGATTCAGAGTATCTCGTCACTCTCGTGGT
GATAGTTCAAAAGCCAAACTATTCACAGTGGCAAAAAACGTATGAATCCCTCTCAGACATGGTGGTTCCTCGGTCAACCA
AACTGATTGCTGAAGATAATGAGGGAGGCCTCTTTACAGTCACGCTGTTTCGGAGAGTGATCGATGATTTCAAAGTCAAA
GCTAGAGAAAAGAAGTTCATTGTCCGTGAATTTTTCTATGATGAAAAAGAAATTAAAACTGAAAGGGAAGAGATGACTAA
ATTGCTTTCTGAAAAGAAGCAACAGTATGGTCCCCTTTTGCGCTGGCTGAAGGTGAACTTCAGCGAATCGTTTATTGCCT
GGATTCACATAAAGGCTTTGAGAGTATTTGTTGAATCGGTGCTAAGGTATGGACTACCCGTGAATTTTCAGGCAGTGCTT
TTACAGCCCCACAAGAAGGCCACCACCAAGCGGCTAAGAGAGGTTCTAAACTCAGTCTTCAAACACCTGGATGAAGTAGC
GGCAGCAAGTATATTGGATGCTTCTGTGGATATTCCTGGATTACAACTAAATAACCAAGACTATTTTCCTTATGTCTACT
TTCACATTGACCTGAGTCTTCTTGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 1 .79 RPM |
| SRP007412_cerebellum | 0 .65 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 130 .37 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000001927 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000006660 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009748 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000009886 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_2006 | 68.98 | 71.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000014803 retrocopies