Parental gene:

BT.77236, ENSBTAG00000009336

Aliases:None
Description:latexin [Source:RefSeq peptide;Acc:NP_001073809]
Organism:Cow (Bos taurus)
Coordinates:1:109721966..109729694(+)


>ENSBTAG00000009336
ATGGAAATCCCTCCGACCCACTACCCGGCCGCCAGGGCGGCCTCGGTGGTAGAGAGCTGCATCAACTACCAGCAGGGGAC
TCCCCACAAGCTGTTTCTGGTGCAGACAGTCGAACAAGCCAGCCTGGAGGATATTCCAGGAAGAGGACATAAGTACCGCC
TTAAATTTTCTGTGGAAGAAATTATCCAAAAAGAAGTTACAGTGAACTGCACAGCTGAAGTACTGTACCCTCCAACGGGA
CAAGATACTGCACCAGAAGTCAACTTCACATTTGAAGGAGAAATTGGGAAAAACCCAGATGAAGAAGATAACACATTTTA
TCAAAGACTCAAGTCCATGAAGGAACCACTAGACGCACAAAATATTCCAGACAGTTTTGGAAATGTACCTCCAGAAATGA
AGCCAGTTCGACATTTAGCCTGGGTTGCCAGTGGTTATATAATATGGCAAAATTCTACTGAAAATACATGGTATAAAATG
GCAAAAATTCAAACTGTCAAGCAAGTGCAAAGAAATGATGACTTCATCGAGCTAGACTACACTATTCTCCTTCATGACAT
TGCATCTCAGGAGATTATTCCTTGGCAAATGCAAGTTCTCTGGCATCCACAATATGGTACTAAAGTAAAACATAATAGCC
GTCTGCCAAAGGAAGCACAATTGGAATAA

Library Parental gene expression (RPM)
SRP017611_brain 7 .35 RPM
SRP017611_kidney 8 .59 RPM
SRP017611_liver 0 .60 RPM
ERP005899_muscle 10 .77 RPM
ERP005899_liver 1 .51 RPM
SRP030211_testis 4 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000009096 ortholog_one2one 1 retrogene
retro_cfam_1863,
Callithrix jacchus ENSCJAG00000000386 ortholog_one2one 1 retrogene
retro_cjac_1890,
Homo sapiens ENSG00000079257 ortholog_one2one 1 retrogene
retro_hsap_3397,
Gorilla gorilla ENSGGOG00000003092 ortholog_one2one 1 retrogene
retro_ggor_2300,
Macaca mulatta ENSMMUG00000004963 ortholog_one2one 1 retrogene
retro_mmul_2114,
Nomascus leucogenys ENSNLEG00000004229 ortholog_one2one 1 retrogene
retro_nleu_1949,
Pongo abelii ENSPPYG00000014245 ortholog_one2one 1 retrogene
retro_pabe_2791,
Pan troglodytes ENSPTRG00000015571 ortholog_one2one 1 retrogene
retro_ptro_2308,
Pteropus vampyrus ENSPVAG00000013608 ortholog_one2one 2 retrogenes
retro_pvam_94, retro_pvam_962,
Tupaia belangeri ENSTBEG00000017673 ortholog_one2one 3 retrogenes
retro_tbel_2746, retro_tbel_3329, retro_tbel_4516,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_569 84.15 82.43
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2. retro_btau_860 96.85 100.00
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Download FASTA sequences of all ENSBTAG00000009336 retrocopies