Parental gene:

TMCO1, ENSBTAG00000010009

Aliases:None
Description:Transmembrane and coiled-coil domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q3T0N3]
Organism:Cow (Bos taurus)
Coordinates:3:3166688..3222619(+)


>ENSBTAG00000010009
ATGAGCACGATGTTCGCAGACACGCTGCTCATCGTTTTTATCTCCGTGTGCACCGCTCTGCTTGCCGAGGGTATAACTTG
GGTCCTGGTTTACAGGACAGACAAGTACAAGAGACTGAAGGCAGAAGTGGAAAAACAGAGTAAAAAATTGGAAAAGAAGA
AGGAAACAATAACAGAGTCAGCTGGTCGACAACAAAAAAAGAAAATTGAGCGGCAAGAAGAGAAACTGAAGAATAACAAC
AGAGATCTGTCAATGGTTCGAATGAAATCCATGTTTGCAATTGGCTTTTGTTTTACTGCCTTAATGGGAATGTTTAATTC
CATATTTGATGGCAGAGTGGTGGCAAAGCTGCCTTTCACCCCCCTGTCCTACATCCAGGGACTGTCTCACCGAAATCTGC
TCGGGGATGACACCACAGACTGTTCCTTCATCTTCCTGTATATTCTCTGTACCATGTCAATTCGACAGAACATCCAGAAG
ATTCTTGGCCTTGCCCCTTCACGAGCTGCCACAAAGCAGGCAGGTGGATTTCTTGGCCCTCCACCTCCTTCTGGGAAGTT
CTCTTGA

Library Parental gene expression (RPM)
SRP017611_brain 46 .73 RPM
SRP017611_kidney 36 .57 RPM
SRP017611_liver 48 .40 RPM
ERP005899_muscle 49 .73 RPM
ERP005899_liver 53 .21 RPM
SRP030211_testis 32 .24 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000013472 ortholog_one2one 2 retrogenes
retro_cfam_1640, retro_cfam_833,
Echinops telfairi ENSETEG00000009382 ortholog_one2one 2 retrogenes
retro_etel_1552, retro_etel_570,
Macropus eugenii ENSMEUG00000011045 ortholog_one2one 2 retrogenes
retro_meug_894, retro_meug_997,
Monodelphis domestica ENSMODG00000001335 ortholog_one2one 2 retrogenes
retro_mdom_1319, retro_mdom_334,
Oryctolagus cuniculus ENSOCUG00000008441 ortholog_one2one 2 retrogenes
retro_ocun_1148, retro_ocun_1642,
Sarcophilus harrisii ENSSHAG00000016602 ortholog_one2one 1 retrogene
retro_shar_790,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1441 66.98 54.79
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Download FASTA sequences of all ENSBTAG00000010009 retrocopies