Parental gene: | TMCO1, ENSOCUG00000008441 |
| Aliases: | None |
| Description: | transmembrane and coiled-coil domains 1 [Source:HGNC Symbol;Acc:18188] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 13:27115122..27175196(+) |
>ENSOCUG00000008441
ATGAGCACCATGTTCGCGGACACGCTACTCATCGTTTTTATCTCCGTGTGCACGGCTCTTCTCGCGGAGGGCATAACCTG
GGTCCTGGTTTATAGGACAGACAAGTACAAGAGACTGAAGGCAGAAGTGGAAAAGCAGAGTAAAAAATTGGAAAAGAAGA
AGGAAACGATAACAGAGTCAGCTGGCCGACAACAAAAGAAGAAAATAGAGAGGCAAGAAGAGAAACTGAAGAATAACAAC
AGAGATCTATCAATGGTTCGAATGAAATCCATGTTTGCAATTGGCTTTTGTTTTACTGCCCTAATGGGAATGTTCAATTC
CATATTTGATGGAAGAGTTGTAGCAAAACTCCCCTTTACCCCCCTTTCCTACATCCAAGGACTGTCTCATCGAAACTTGC
TGGGGGATGACACAACGGACTGTTCCTTCATCTTCCTGTATATTCTGTGTACTATGTCGATTCGACAGAACATCCAGAAG
ATTCTCGGCCTTGCCCCTTCACGAGCTGCCACCAAGCAGGCAGGTGGATTTCTTGGCCCTCCACCTCCTTCTGGAAAGTT
CTCTTGA
ATGAGCACCATGTTCGCGGACACGCTACTCATCGTTTTTATCTCCGTGTGCACGGCTCTTCTCGCGGAGGGCATAACCTG
GGTCCTGGTTTATAGGACAGACAAGTACAAGAGACTGAAGGCAGAAGTGGAAAAGCAGAGTAAAAAATTGGAAAAGAAGA
AGGAAACGATAACAGAGTCAGCTGGCCGACAACAAAAGAAGAAAATAGAGAGGCAAGAAGAGAAACTGAAGAATAACAAC
AGAGATCTATCAATGGTTCGAATGAAATCCATGTTTGCAATTGGCTTTTGTTTTACTGCCCTAATGGGAATGTTCAATTC
CATATTTGATGGAAGAGTTGTAGCAAAACTCCCCTTTACCCCCCTTTCCTACATCCAAGGACTGTCTCATCGAAACTTGC
TGGGGGATGACACAACGGACTGTTCCTTCATCTTCCTGTATATTCTGTGTACTATGTCGATTCGACAGAACATCCAGAAG
ATTCTCGGCCTTGCCCCTTCACGAGCTGCCACCAAGCAGGCAGGTGGATTTCTTGGCCCTCCACCTCCTTCTGGAAAGTT
CTCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 39 .62 RPM |
| SRP017611_kidney | 77 .54 RPM |
| SRP017611_brain | 38 .30 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000010009 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000013472 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000009382 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000011045 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000001335 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000016602 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_1148 | 77.68 | 57.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1642 | 65.00 | 73.40 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000008441 retrocopies