Parental gene: | EIF4E2, ENSBTAG00000010598 |
| Aliases: | None |
| Description: | eukaryotic translation initiation factor 4E type 2 isoform 1 [Source:RefSeq peptide;Acc:NP_001069263] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 2:120995643..121025344(+) |
>ENSBTAG00000010598
ATGAACAACAAGTTCGACGCATTGAAAGATGATGACAGTGGGGACCATGATCAGAATGAAGAAAACAGCACACAGAAAGA
TGGTGAGAAGGAAAAAACGGAACGAGACAAGAGTCAGAGCAGCAGTAAGAGGAAGGCTGTCGTCCCTGGGCCGGCCGAGC
ACCCACTGCAGTATAACTACACTTTTTGGTACTCCAGGAGAACCCCCGGCCGTCCCACCAGCTCACAGAGCTATGAACAG
AATATCAAACAGATTGGCACCTTTGCCTCTGTGGAGCAGTTCTGGAGGTTTTACAGCCACATGGTGCGTCCCGGGGACTT
GACAGGCCACAGCGACTTCCATCTCTTCAAAGAAGGAATTAAACCCATGTGGGAGGATGATGCAAATAAAAATGGCGGAA
AGTGGATAATTCGACTGCGGAAGGGCTTGGCATCCCGCTGCTGGGAGAATCTCATCTTGGCTATGCTGGGGGAACAGTTC
ATGGTTGGGGAGGAGATCTGCGGGGCTGTGGTCTCTGTCCGCTTTCAGGAGGACATTATTTCCATATGGAATAAGACTGC
CAGCGATCAAGCCACCACGGCCCGCATACGGGATACGCTTCGGCGAGTGCTTAACCTACCTCCCAACACCATTATGGAAT
ACAAAACCCACACCGACAGCATCAAGGCCTGGGAGGAGTTTCATGGCCTGGTGAACAGCAGCGGCCGCTGA
ATGAACAACAAGTTCGACGCATTGAAAGATGATGACAGTGGGGACCATGATCAGAATGAAGAAAACAGCACACAGAAAGA
TGGTGAGAAGGAAAAAACGGAACGAGACAAGAGTCAGAGCAGCAGTAAGAGGAAGGCTGTCGTCCCTGGGCCGGCCGAGC
ACCCACTGCAGTATAACTACACTTTTTGGTACTCCAGGAGAACCCCCGGCCGTCCCACCAGCTCACAGAGCTATGAACAG
AATATCAAACAGATTGGCACCTTTGCCTCTGTGGAGCAGTTCTGGAGGTTTTACAGCCACATGGTGCGTCCCGGGGACTT
GACAGGCCACAGCGACTTCCATCTCTTCAAAGAAGGAATTAAACCCATGTGGGAGGATGATGCAAATAAAAATGGCGGAA
AGTGGATAATTCGACTGCGGAAGGGCTTGGCATCCCGCTGCTGGGAGAATCTCATCTTGGCTATGCTGGGGGAACAGTTC
ATGGTTGGGGAGGAGATCTGCGGGGCTGTGGTCTCTGTCCGCTTTCAGGAGGACATTATTTCCATATGGAATAAGACTGC
CAGCGATCAAGCCACCACGGCCCGCATACGGGATACGCTTCGGCGAGTGCTTAACCTACCTCCCAACACCATTATGGAAT
ACAAAACCCACACCGACAGCATCAAGGCCTGGGAGGAGTTTCATGGCCTGGTGAACAGCAGCGGCCGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 6 .53 RPM |
| SRP017611_kidney | 9 .25 RPM |
| SRP017611_liver | 2 .64 RPM |
| ERP005899_muscle | 10 .08 RPM |
| ERP005899_liver | 2 .23 RPM |
| SRP030211_testis | 17 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016456 | possible_ortholog | 1 retrogene | |
| Bos taurus | ENSBTAG00000003103 | within_species_paralog | 1 retrogene | |
| Bos taurus | ENSBTAG00000009522 | within_species_paralog | 3 retrogenes | |
| Canis familiaris | ENSCAFG00000011328 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013786 | possible_ortholog | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000015082 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011269 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000005206 | possible_ortholog | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009155 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000013108 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1232 | 61.38 | 60.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1498 | 100.00 | 94.07 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000010598 retrocopies