Parental gene: | APH1B, ENSBTAG00000010641 |
| Aliases: | None |
| Description: | gamma-secretase subunit APH-1B [Source:RefSeq peptide;Acc:NP_001178332] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 10:46788193..46828932(-) |
>ENSBTAG00000010641
ATGACGGCGGCCGTGTTCTTCGGCTGCGCCTTCATTGCCTTCGGGCCTGCGCTTGCCCTCTACATCTTCACCATCGTCAC
CGAGCCGTTACGCATCATCTTTCTCATCATTGGAGCTTTCTTCTGGTTGGTGTCTCTGCTGTTTTCTTCCCTCATTTGGT
TCACGACAGCAACCCTTATTGGTAACAAAGATGAACCAAGAGAGAAATATCTGCTGATATTTGGAGTGTTAATCTCAGTC
CTTATCCAAGAAATGTTCCGGTTTGCATATTATAAACTTTTAAAAAAAGCCAGTGAGGGTTTGAAGACTATAAACCCATA
TGAGAAAGCACCCTCTATGAGATTGCTGGCTTATGCTTTCATGACACTGGTGATCACGCTGCTGCACGTGTTCTGGGGCA
TCGTGTTTTTCGATGGCTGTGAGAAGAAGAAGTGGTATACCCTTCTTGTAGTTCTTCTCTCCCATCTGCTGGTGTCAGCC
CTGACCTTAATCAGTCCTCATTACGGATTAAATCTGGTGTTGGCATATATCATCATGGTGCTCATGGGCGTCTGGGCCTT
CTTTGTTTCTGGAGGCAGCTGCCGAAGCCTGAAACTCTGCCTGCTCTGCCAAGACAAGGACTTCCTCCTCTTCAACCAGC
GTGCCAGATAA
ATGACGGCGGCCGTGTTCTTCGGCTGCGCCTTCATTGCCTTCGGGCCTGCGCTTGCCCTCTACATCTTCACCATCGTCAC
CGAGCCGTTACGCATCATCTTTCTCATCATTGGAGCTTTCTTCTGGTTGGTGTCTCTGCTGTTTTCTTCCCTCATTTGGT
TCACGACAGCAACCCTTATTGGTAACAAAGATGAACCAAGAGAGAAATATCTGCTGATATTTGGAGTGTTAATCTCAGTC
CTTATCCAAGAAATGTTCCGGTTTGCATATTATAAACTTTTAAAAAAAGCCAGTGAGGGTTTGAAGACTATAAACCCATA
TGAGAAAGCACCCTCTATGAGATTGCTGGCTTATGCTTTCATGACACTGGTGATCACGCTGCTGCACGTGTTCTGGGGCA
TCGTGTTTTTCGATGGCTGTGAGAAGAAGAAGTGGTATACCCTTCTTGTAGTTCTTCTCTCCCATCTGCTGGTGTCAGCC
CTGACCTTAATCAGTCCTCATTACGGATTAAATCTGGTGTTGGCATATATCATCATGGTGCTCATGGGCGTCTGGGCCTT
CTTTGTTTCTGGAGGCAGCTGCCGAAGCCTGAAACTCTGCCTGCTCTGCCAAGACAAGGACTTCCTCCTCTTCAACCAGC
GTGCCAGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 3 .97 RPM |
| SRP017611_kidney | 3 .38 RPM |
| SRP017611_liver | 0 .53 RPM |
| ERP005899_muscle | 0 .42 RPM |
| ERP005899_liver | 0 .00 RPM |
| SRP030211_testis | 19 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Sus scrofa | ENSSSCG00000004567 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000006865 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1423 | 63.64 | 54.63 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000010641 retrocopies