Parental gene: | APH1B, ENSSSCG00000004567 |
| Aliases: | None |
| Description: | APH1B gamma secretase subunit [Source:HGNC Symbol;Acc:24080] |
| Organism: | Pig (Sus scrofa) |
| Coordinates: | 1:119981030..119988575(-) |
>ENSSSCG00000004567
ATGACGGCGGCCGTGTTCTTCGGCTGCGCTTTCATTGCCTTCGGGCCTGCTCTCGCCCTCTACGTCTTCACCATCGCCAC
CGAGCCGTTGCGCATCATCCTCCTCATCATTGGAGCCTTCTTCTGGTTGGTGTCTCTGCTGCTTTCCTCCCTAGTTTGGT
TCATGGCAACAACCATTACTGATAACAAAGATGAACGAGTCCAGAAATATCTGCTGATCTTTGGAGTGTTGGTCTCAGTC
CTTATCCAAGAAACATTCCGGTTTGCATATTATAAACTTTTAAAAAAGGCCAGTGAAGGTTTGAAGAGTTTAAACCCAGA
TGAGACAGCACCCTCTATGCGATTGCTGGCTTATGTTTCTGGCCTGGGCTTTGGAATCATGAGTGGAGTATTTTCCTTTG
TGAATACCCTGTCTGACTCCTTGGGGCCGGGCACGGTGGGCATTCATGGAGACCCTCCCCAGTTCTTCCTAAATTCAGGT
ATGTGTCTCGTAGTTGTGAATATTCAGGCTTCTCGTCTAAGT
ATGACGGCGGCCGTGTTCTTCGGCTGCGCTTTCATTGCCTTCGGGCCTGCTCTCGCCCTCTACGTCTTCACCATCGCCAC
CGAGCCGTTGCGCATCATCCTCCTCATCATTGGAGCCTTCTTCTGGTTGGTGTCTCTGCTGCTTTCCTCCCTAGTTTGGT
TCATGGCAACAACCATTACTGATAACAAAGATGAACGAGTCCAGAAATATCTGCTGATCTTTGGAGTGTTGGTCTCAGTC
CTTATCCAAGAAACATTCCGGTTTGCATATTATAAACTTTTAAAAAAGGCCAGTGAAGGTTTGAAGAGTTTAAACCCAGA
TGAGACAGCACCCTCTATGCGATTGCTGGCTTATGTTTCTGGCCTGGGCTTTGGAATCATGAGTGGAGTATTTTCCTTTG
TGAATACCCTGTCTGACTCCTTGGGGCCGGGCACGGTGGGCATTCATGGAGACCCTCCCCAGTTCTTCCTAAATTCAGGT
ATGTGTCTCGTAGTTGTGAATATTCAGGCTTCTCGTCTAAGT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP014902_placenta | 0 .27 RPM |
| SRP014902_testis | 1 .98 RPM |
| SRP018856_adipose | 4 .34 RPM |
| SRP018288_kidney | 0 .69 RPM |
| SRP018288_lung | 1 .53 RPM |
| SRP018288_liver | 0 .00 RPM |
| SRP018288_heart | 0 .42 RPM |
| SRP035408_liver | 0 .00 RPM |
| SRP035408_brain | 0 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000010641 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000006865 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_sscr_325 | 69.07 | 55.75 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSSSCG00000004567 retrocopies