Parental gene:

C15H11orf46, ENSBTAG00000012417

Aliases:ARL14EP, ARF7EP, C11orf46, C15H11orf46
Description:ARF7 effector protein [Source:UniProtKB/Swiss-Prot;Acc:Q5EA92]
Organism:Cow (Bos taurus)
Coordinates:15:61834228..61847775(+)


>ENSBTAG00000012417
ATGATGGATCCATGTTCAGTTGGAGTCCAGCTTCGAACCACAAATGAGTGCCATAAAACCTATTATACTCGTCATACAGG
TTTCAAGACTTTGCAAGAATTGTCATCAAATGACATGCTTCTACTTCAGTTGAGAACTGGAATGACACTTTCTGGGAACA
ATACAATCTGCTTCCATCATGCAAAAGTTTACATCGACAGATTTGAGGATTTGCAGAAGTCATGTTGTGACCCATTTAAC
ATACACAAAAAACTAGCCAAAAAAAATTTACATGTAATTGATTTAGATGATGCCACTTTTCTGAGTGCAAAATTTGGAAG
ACAGCTTGTACCTGGTTGGAAGCTTTGTCCAAAATGTACACAGATAATCAATGGAAGTGTGGATGTTGATTCTGAAGACC
GGCAGAAAAGAAAACCTGACTCAGACGGAAGAACTGCTAAAGCTTTGAGGTCATTACAATTTGCAAATCCAGGAAAGCAA
ACTGAATTTGCTCCAGAAACTGGTAAAAGAGAAAAAAGAAGGCTTACCAAAAATGCAACAGCTGGTTCAGACAGACAGGT
GATCCCGGCAAAGAGTAAGGTCTACGATAGCCAGGGTCTCCTGATTTTCAGTGGAATGGACCTCTGTGACTGCCTCGATG
AAGACTGCTTAGGCTGTTTCTATGCTTGTCCTGCCTGCGGTTCTACCAAATGTGGTGCCGAATGCCGCTGTGATCGAAAG
TGGCTATATGAGCAAATTGAAATCGAAGGAGGAGAAATAATTCATAACAAACATGCTGGATAA

Library Parental gene expression (RPM)
ERP005899_liver 13 .19 RPM
ERP005899_muscle 22 .22 RPM
SRP017611_brain 18 .04 RPM
SRP017611_kidney 18 .37 RPM
SRP017611_liver 8 .53 RPM
SRP030211_testis 103 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012698 ortholog_one2one 1 retrogene
retro_chof_1155,
Felis catus ENSFCAG00000028620 ortholog_one2one 1 retrogene
retro_fcat_437,
Microcebus murinus ENSMICG00000011547 ortholog_one2one 2 retrogenes
retro_mmur_1003, retro_mmur_131,
Macaca mulatta ENSMMUG00000017590 ortholog_one2one 2 retrogenes
retro_mmul_1793, retro_mmul_984,
Mus musculus ENSMUSG00000027122 ortholog_one2one 1 retrogene
retro_mmus_3319,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1266 91.19 100.00
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Download FASTA sequences of all ENSBTAG00000012417 retrocopies