Parental gene: | C15H11orf46, ENSBTAG00000012417 |
| Aliases: | ARL14EP, ARF7EP, C11orf46, C15H11orf46 |
| Description: | ARF7 effector protein [Source:UniProtKB/Swiss-Prot;Acc:Q5EA92] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 15:61834228..61847775(+) |
>ENSBTAG00000012417
ATGATGGATCCATGTTCAGTTGGAGTCCAGCTTCGAACCACAAATGAGTGCCATAAAACCTATTATACTCGTCATACAGG
TTTCAAGACTTTGCAAGAATTGTCATCAAATGACATGCTTCTACTTCAGTTGAGAACTGGAATGACACTTTCTGGGAACA
ATACAATCTGCTTCCATCATGCAAAAGTTTACATCGACAGATTTGAGGATTTGCAGAAGTCATGTTGTGACCCATTTAAC
ATACACAAAAAACTAGCCAAAAAAAATTTACATGTAATTGATTTAGATGATGCCACTTTTCTGAGTGCAAAATTTGGAAG
ACAGCTTGTACCTGGTTGGAAGCTTTGTCCAAAATGTACACAGATAATCAATGGAAGTGTGGATGTTGATTCTGAAGACC
GGCAGAAAAGAAAACCTGACTCAGACGGAAGAACTGCTAAAGCTTTGAGGTCATTACAATTTGCAAATCCAGGAAAGCAA
ACTGAATTTGCTCCAGAAACTGGTAAAAGAGAAAAAAGAAGGCTTACCAAAAATGCAACAGCTGGTTCAGACAGACAGGT
GATCCCGGCAAAGAGTAAGGTCTACGATAGCCAGGGTCTCCTGATTTTCAGTGGAATGGACCTCTGTGACTGCCTCGATG
AAGACTGCTTAGGCTGTTTCTATGCTTGTCCTGCCTGCGGTTCTACCAAATGTGGTGCCGAATGCCGCTGTGATCGAAAG
TGGCTATATGAGCAAATTGAAATCGAAGGAGGAGAAATAATTCATAACAAACATGCTGGATAA
ATGATGGATCCATGTTCAGTTGGAGTCCAGCTTCGAACCACAAATGAGTGCCATAAAACCTATTATACTCGTCATACAGG
TTTCAAGACTTTGCAAGAATTGTCATCAAATGACATGCTTCTACTTCAGTTGAGAACTGGAATGACACTTTCTGGGAACA
ATACAATCTGCTTCCATCATGCAAAAGTTTACATCGACAGATTTGAGGATTTGCAGAAGTCATGTTGTGACCCATTTAAC
ATACACAAAAAACTAGCCAAAAAAAATTTACATGTAATTGATTTAGATGATGCCACTTTTCTGAGTGCAAAATTTGGAAG
ACAGCTTGTACCTGGTTGGAAGCTTTGTCCAAAATGTACACAGATAATCAATGGAAGTGTGGATGTTGATTCTGAAGACC
GGCAGAAAAGAAAACCTGACTCAGACGGAAGAACTGCTAAAGCTTTGAGGTCATTACAATTTGCAAATCCAGGAAAGCAA
ACTGAATTTGCTCCAGAAACTGGTAAAAGAGAAAAAAGAAGGCTTACCAAAAATGCAACAGCTGGTTCAGACAGACAGGT
GATCCCGGCAAAGAGTAAGGTCTACGATAGCCAGGGTCTCCTGATTTTCAGTGGAATGGACCTCTGTGACTGCCTCGATG
AAGACTGCTTAGGCTGTTTCTATGCTTGTCCTGCCTGCGGTTCTACCAAATGTGGTGCCGAATGCCGCTGTGATCGAAAG
TGGCTATATGAGCAAATTGAAATCGAAGGAGGAGAAATAATTCATAACAAACATGCTGGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 18 .04 RPM |
| SRP017611_kidney | 18 .37 RPM |
| SRP017611_liver | 8 .53 RPM |
| ERP005899_muscle | 22 .22 RPM |
| ERP005899_liver | 13 .19 RPM |
| SRP030211_testis | 103 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012698 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000028620 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000011547 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000017590 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000027122 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1266 | 91.19 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000012417 retrocopies