Parental gene: | SP2, ENSBTAG00000013740 |
| Aliases: | None |
| Description: | Transcription factor Sp2 [Source:UniProtKB/Swiss-Prot;Acc:Q5E9U0] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 19:39194569..39296546(-) |
>ENSBTAG00000013740
ATGAGCGATCCACAGACCAGCATGGCTGCCACTGCCGCTGTCAGTCCCAGTGACTACCTGCAGCCTGCCGCCTCTACCAC
CCAGGACTCCCAGCCATCTCCCTTAGCGCTGCTTGCCGCGACATGTAGCAAAATCGGCCCTCCAGCTGTTGAAGCTGCGG
TGACGCCTCCTGCTCCCCCCCAGCCCACTCCACGGAAACTCGTCCCTATCAAACCCGCCCCTCTCCCTCTCAGCCCCAGC
AAGAATAGTTTTGGAATCTTGTCCTCCAAGGGAAACATACTTCAGATTCAGGGGTCACAGCTGAGCACGTCCTACCCTGG
GGGGCAGCTGGTGTTTGCCATCCAGAATCCCACCGTGGTCAACAAAGGGACCCGATCGAACACCAGTATCCAGTACCAGG
CGGTCCCTCAGATCCAGGCCAGCAGTCCTCAGACCATCCAGGTGCAGCCCAGTCTGACCAACCAGATCCAGATCATCCCT
GGCACCAACCAAGCCATCATCACCCCGTCCCCGTCCAGTCACAAGCCCGTCCCCATCAAGCCAGCCCCTGTCCAGAAGTC
AAGTACGACCACCACTCCGGCACAGAGCGGGGCCAATGTGGTGAAGCTGACAGGTGGCGGTGGCAATGTGACCCTTACTC
TGCCTGTCAACAACCTCGTGAACACCAGCGACCCCGGGGCCGCCACTCAGCTCCTCACGGAGAGCCCCCCTGCCCCACTG
TCTAAGACTAACAAGAAAGCCAGGAAGAAGAGTCTTCCTGCCGCCCAGCCCCCTGTGGCTGTGGCCGAGCAGGTGGAGAC
GGTGCTGATCGAGACCACTGCAGACAACATTATCCAAGCAGGAAACAACCTGCTCATTGTTCAGAGCCCCGGCGGGGGCC
AGCCAGCCGTGGTCCAGCAGGTCCAGGTGGTGCCCCCCAAGGCCGAGCAGCAGCAGGTGGTGCAGATTCCACAGCAGGCC
CTGCGGGTGGTACAGGCAGCGTCCGCCACACTCCCCACCGTCCCCCAGAAGCCCTCCCAGAACTTCCAGATCCAGGCTGC
TGAGCCGTCACCTACTCAGGTCTACATCCGTACGCCTTCTGGTGAGGTACAGACGGTCCTTGTCCAGGACAGCCCCCCAG
CAACAGCTGCGACTGCCTCCACCACCACTTGTAGCAGCCCCGCGTCCCGTGCTGCCCATCTGAGTGGGACCAGCAAAAAG
CACTCGGCTGCAATTCTCCGAAAAGAACGACCCCTGCCAAAGATCGCTCCTGCTGGGAGCATCATCAGCCTGAACGCAGC
ACAGCTGGCAGCGGCGGCCCAGGCCATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCCCGTCACCATCA
CCAACACTGGCGGACAGCAGCAGCTGACTGTGCAGAATGTATCTGGAAACAACCTGACCATCAGTGGGCTGAGCCCCACC
CAGATCCAGCTGCAGATGGAACAGGCCCTGGCTGGAGAGACCCAGCCTGGGGAAAAGCGGCGCCGCATGGCCTGCACGTG
TCCCAACTGCAAGGACGGGGACAAGAGGTCTGGAGAGCAGGGCAAGAAGAAGCACGTGTGCCACATCCCCGACTGCGGCA
AGACCTTCCGTAAGACGTCCTTGCTGCGGGCTCACGTGCGCCTGCACACCGGCGAGCGGCCCTTTGTCTGCAACTGGTTC
TTCTGTGGCAAGAGGTTCACACGGAGCGACGAGCTCCAGCGGCATGCCCGCACCCACACAGGGGACAAACGCTTCGAGTG
TGCCCAGTGTCAGAAGCGCTTCATGAGGAGTGACCACCTCACCAAGCATTACAAGACCCACCTGGTCACGAAGAACTTGT
AA
ATGAGCGATCCACAGACCAGCATGGCTGCCACTGCCGCTGTCAGTCCCAGTGACTACCTGCAGCCTGCCGCCTCTACCAC
CCAGGACTCCCAGCCATCTCCCTTAGCGCTGCTTGCCGCGACATGTAGCAAAATCGGCCCTCCAGCTGTTGAAGCTGCGG
TGACGCCTCCTGCTCCCCCCCAGCCCACTCCACGGAAACTCGTCCCTATCAAACCCGCCCCTCTCCCTCTCAGCCCCAGC
AAGAATAGTTTTGGAATCTTGTCCTCCAAGGGAAACATACTTCAGATTCAGGGGTCACAGCTGAGCACGTCCTACCCTGG
GGGGCAGCTGGTGTTTGCCATCCAGAATCCCACCGTGGTCAACAAAGGGACCCGATCGAACACCAGTATCCAGTACCAGG
CGGTCCCTCAGATCCAGGCCAGCAGTCCTCAGACCATCCAGGTGCAGCCCAGTCTGACCAACCAGATCCAGATCATCCCT
GGCACCAACCAAGCCATCATCACCCCGTCCCCGTCCAGTCACAAGCCCGTCCCCATCAAGCCAGCCCCTGTCCAGAAGTC
AAGTACGACCACCACTCCGGCACAGAGCGGGGCCAATGTGGTGAAGCTGACAGGTGGCGGTGGCAATGTGACCCTTACTC
TGCCTGTCAACAACCTCGTGAACACCAGCGACCCCGGGGCCGCCACTCAGCTCCTCACGGAGAGCCCCCCTGCCCCACTG
TCTAAGACTAACAAGAAAGCCAGGAAGAAGAGTCTTCCTGCCGCCCAGCCCCCTGTGGCTGTGGCCGAGCAGGTGGAGAC
GGTGCTGATCGAGACCACTGCAGACAACATTATCCAAGCAGGAAACAACCTGCTCATTGTTCAGAGCCCCGGCGGGGGCC
AGCCAGCCGTGGTCCAGCAGGTCCAGGTGGTGCCCCCCAAGGCCGAGCAGCAGCAGGTGGTGCAGATTCCACAGCAGGCC
CTGCGGGTGGTACAGGCAGCGTCCGCCACACTCCCCACCGTCCCCCAGAAGCCCTCCCAGAACTTCCAGATCCAGGCTGC
TGAGCCGTCACCTACTCAGGTCTACATCCGTACGCCTTCTGGTGAGGTACAGACGGTCCTTGTCCAGGACAGCCCCCCAG
CAACAGCTGCGACTGCCTCCACCACCACTTGTAGCAGCCCCGCGTCCCGTGCTGCCCATCTGAGTGGGACCAGCAAAAAG
CACTCGGCTGCAATTCTCCGAAAAGAACGACCCCTGCCAAAGATCGCTCCTGCTGGGAGCATCATCAGCCTGAACGCAGC
ACAGCTGGCAGCGGCGGCCCAGGCCATGCAGACCATCAACATCAATGGTGTCCAGGTCCAGGGCGTGCCCGTCACCATCA
CCAACACTGGCGGACAGCAGCAGCTGACTGTGCAGAATGTATCTGGAAACAACCTGACCATCAGTGGGCTGAGCCCCACC
CAGATCCAGCTGCAGATGGAACAGGCCCTGGCTGGAGAGACCCAGCCTGGGGAAAAGCGGCGCCGCATGGCCTGCACGTG
TCCCAACTGCAAGGACGGGGACAAGAGGTCTGGAGAGCAGGGCAAGAAGAAGCACGTGTGCCACATCCCCGACTGCGGCA
AGACCTTCCGTAAGACGTCCTTGCTGCGGGCTCACGTGCGCCTGCACACCGGCGAGCGGCCCTTTGTCTGCAACTGGTTC
TTCTGTGGCAAGAGGTTCACACGGAGCGACGAGCTCCAGCGGCATGCCCGCACCCACACAGGGGACAAACGCTTCGAGTG
TGCCCAGTGTCAGAAGCGCTTCATGAGGAGTGACCACCTCACCAAGCATTACAAGACCCACCTGGTCACGAAGAACTTGT
AA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 5 .62 RPM |
| SRP017611_kidney | 6 .34 RPM |
| SRP017611_liver | 2 .49 RPM |
| ERP005899_muscle | 6 .02 RPM |
| ERP005899_liver | 2 .52 RPM |
| SRP030211_testis | 30 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000017488 | other_paralog | 1 retrogene | |
| Bos taurus | ENSBTAG00000020355 | other_paralog | 1 retrogene | |
| Bos taurus | ENSBTAG00000038055 | other_paralog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000015926 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1617 | 98.86 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000013740 retrocopies