Parental gene: | KLF3, ENSBTAG00000017488 |
| Aliases: | None |
| Description: | Krueppel-like factor 3 [Source:RefSeq peptide;Acc:NP_001192907] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 6:59593803..59610697(+) |
>ENSBTAG00000017488
ATGCTCATGTTTGACCCAGTCCCTGTCAAGCAAGAGGCCATGGACCCTGTCTCGGTGTCATACCCGTCTAATTACATGGA
GTCGATGAAGCCCAACAAGTACGGCGTCATCTACTCCACGCCATTGTCGGATAAGTTCTTCCAGACGCCGGAAGGCCTGT
CTCACGGGATGCAGATGGAGCCGGTGGACCTCACGGTCAACAAGCGGAGCTCGCCGCCCTCGGCCGGGAACTCGCCGTCC
TCCCTGAAGTTCCAGTCCTCCCACAGGCGCGCCTCGCCCGGGCTGAGCCTGCCCTCGTCCAGCCCGCCGGGGAAGAAGTA
CTCGCCGCCGCCGCCGCCCGGCGTGCAGCCCTTCAGCGTGCCGCTGTCCATGCCGCCGGTGATGGCCGCGGCCCTGTCCC
GCCACGGCATCCGGAGCCCGGGCATCCTGCCCGTCATCCAGCCCGTCGTCGTGCAGCCTGTCCCCTTCATGTACACCAGC
CACCTCCAGCAGCCGCTCATGGTCTCCTTGTCGGAGGAGATGGAAAATTCCAGTAGTAGCATGCAAGTACCTGTAATTGA
ATCATATGAGAAGCCTATATTGCAGAAAAAAATTAAAATAGAACCTGGGATCGAACCACAGAGGACAGATTATTATCCCG
AAGAAATGTCACCCCCTTTAATGAACTCAGTGTCCCCCCCGCAAGCATTGTTGCAAGAGAATCACCCTTCAGTCATCGTG
CAGCCCGGGAAGAGACCTTTACCTGTGGAATCCCCAGACACGCAAAGGAAGCGGAGAATACACAGATGTGATTATGACGG
ATGCAACAAAGTGTACACTAAAAGCTCTCACTTGAAAGCACACAGAAGAACACATACAGGAGAAAAACCCTACAAATGTA
CGTGGGAAGGATGCACATGGAAATTTGCTCGGTCTGATGAACTCACAAGACATTTCCGGAAACACACTGGAATCAAACCT
TTCCAGTGTCCAGACTGTGACCGCAGCTTCTCCCGCTCCGACCACCTTGCTCTGCACAGGAAGCGCCACATGCTCGTGTG
A
ATGCTCATGTTTGACCCAGTCCCTGTCAAGCAAGAGGCCATGGACCCTGTCTCGGTGTCATACCCGTCTAATTACATGGA
GTCGATGAAGCCCAACAAGTACGGCGTCATCTACTCCACGCCATTGTCGGATAAGTTCTTCCAGACGCCGGAAGGCCTGT
CTCACGGGATGCAGATGGAGCCGGTGGACCTCACGGTCAACAAGCGGAGCTCGCCGCCCTCGGCCGGGAACTCGCCGTCC
TCCCTGAAGTTCCAGTCCTCCCACAGGCGCGCCTCGCCCGGGCTGAGCCTGCCCTCGTCCAGCCCGCCGGGGAAGAAGTA
CTCGCCGCCGCCGCCGCCCGGCGTGCAGCCCTTCAGCGTGCCGCTGTCCATGCCGCCGGTGATGGCCGCGGCCCTGTCCC
GCCACGGCATCCGGAGCCCGGGCATCCTGCCCGTCATCCAGCCCGTCGTCGTGCAGCCTGTCCCCTTCATGTACACCAGC
CACCTCCAGCAGCCGCTCATGGTCTCCTTGTCGGAGGAGATGGAAAATTCCAGTAGTAGCATGCAAGTACCTGTAATTGA
ATCATATGAGAAGCCTATATTGCAGAAAAAAATTAAAATAGAACCTGGGATCGAACCACAGAGGACAGATTATTATCCCG
AAGAAATGTCACCCCCTTTAATGAACTCAGTGTCCCCCCCGCAAGCATTGTTGCAAGAGAATCACCCTTCAGTCATCGTG
CAGCCCGGGAAGAGACCTTTACCTGTGGAATCCCCAGACACGCAAAGGAAGCGGAGAATACACAGATGTGATTATGACGG
ATGCAACAAAGTGTACACTAAAAGCTCTCACTTGAAAGCACACAGAAGAACACATACAGGAGAAAAACCCTACAAATGTA
CGTGGGAAGGATGCACATGGAAATTTGCTCGGTCTGATGAACTCACAAGACATTTCCGGAAACACACTGGAATCAAACCT
TTCCAGTGTCCAGACTGTGACCGCAGCTTCTCCCGCTCCGACCACCTTGCTCTGCACAGGAAGCGCCACATGCTCGTGTG
A
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 5 .71 RPM |
| SRP017611_kidney | 9 .66 RPM |
| SRP017611_liver | 3 .25 RPM |
| ERP005899_muscle | 16 .73 RPM |
| ERP005899_liver | 3 .24 RPM |
| SRP030211_testis | 1 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000013740 | other_paralog | 1 retrogene | |
| Bos taurus | ENSBTAG00000020355 | other_paralog | 1 retrogene | |
| Bos taurus | ENSBTAG00000038055 | other_paralog | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004256 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003363 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017046 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006524 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_271 | 99.57 | 67.34 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000017488 retrocopies