Parental gene:

FYTTD1, ENSBTAG00000014874

Aliases:None
Description:UAP56-interacting factor [Source:UniProtKB/Swiss-Prot;Acc:Q17QU6]
Organism:Cow (Bos taurus)
Coordinates:1:70954510..70984201(-)


>ENSBTAG00000014874
ATGAACCGGTTTAGTACCCGGTTAATGGGAGCCACCGCAACCCCGCCGCCTGCGCCGCCGAAAGCCCGCAGCAATGAAAA
CCTGGACAAAATTGATATGTCTTTGGATGATATCATCAAGTTGAATCGAAAGGAAGGAAAGAAGCAGAATTTCCCGAGAT
TAAATAGAAGACTTCAGCAAAGTAGTGCCAGGCAATTCAGGATGAGAGTAAGATGGGGTATTCAACAGAATTCTGGTTTT
GGTAAGAATAGTCTGAGCCGTAGAGGAAGAGTGATGCCTGGGAAGAGACGTCCTTATGGAGTTATCACTGGCCTTGCAGC
TAGGAAAGCAACTGGAATTCGAAAAGGAATTAGTCCTATGAATCGACCACCTCTAAGTGACAAGAATATAGAACGATATT
TTCCAGCATTAAAAAGGAAGGCAAACCTTCTGAGACAAAATGAAGTGCAGAGAAAACCAGTTGCAGCTCTCAAGAGACCT
AACCAGTTAAATAGAAAAAATAACATTCCAAATAATTTTACCAGGAGTGGAAATAAATTAAGTCATCAGAAAGACACTCG
TCAGGCAACTTTTCTTTTCAGAAGAGGCCTGAAGGTTCAGGCCCAGTTGAACTCAGAACAACTGCTAGACGATGTAGTAG
CAAAGAGAACTCGTCAATGGCGAACTTCCACCACAAATGGAGGAATTTTGACTGTATCCATTGATAATCCAGGAGCAGTG
CAGTGTCCAGTAACTCAGAAACCACGATTAACTCGTACTGCTGTGCCCTCATTCTTGACAAAACGGGATCAATCTGATAT
AAAGAAAGTTCCTAAAGGTGTCCCCCTACAATTTGACATAAACAGTGTTGGAAAACAGACAGGTATGACTTTGAATGAGC
GATTTGGGATCCTGAAGGAACAAAGAGCCACTCTCACTTTCAACAAAGGAGGAAGCCGCTTTGTAACCGTGGGATAG

Library Parental gene expression (RPM)
SRP017611_brain 17 .91 RPM
SRP017611_kidney 28 .98 RPM
SRP017611_liver 10 .27 RPM
ERP005899_muscle 18 .42 RPM
ERP005899_liver 10 .81 RPM
SRP030211_testis 76 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000029695 ortholog_one2many 1 retrogene
retro_cfam_70,
Choloepus hoffmanni ENSCHOG00000002881 ortholog_one2one 2 retrogenes
retro_chof_1068, retro_chof_114,
Callithrix jacchus ENSCJAG00000016488 ortholog_one2one 2 retrogenes
retro_cjac_1639, retro_cjac_623,
Cavia porcellus ENSCPOG00000011463 ortholog_one2one 2 retrogenes
retro_cpor_1039, retro_cpor_586,
Dasypus novemcinctus ENSDNOG00000007807 ortholog_one2one 6 retrogenes
retro_dnov_1010, retro_dnov_1224, retro_dnov_1311, retro_dnov_2013, retro_dnov_442, retro_dnov_570,
Erinaceus europaeus ENSEEUG00000001433 ortholog_one2many 1 retrogene
retro_eeur_13,
Echinops telfairi ENSETEG00000000700 ortholog_one2one 1 retrogene
retro_etel_765,
Homo sapiens ENSG00000122068 ortholog_one2one 2 retrogenes
retro_hsap_4291, retro_hsap_476,
Gorilla gorilla ENSGGOG00000011665 ortholog_one2one 1 retrogene
retro_ggor_450,
Macaca mulatta ENSMMUG00000006626 ortholog_one2one 1 retrogene
retro_mmul_577,
Nomascus leucogenys ENSNLEG00000015547 ortholog_one2one 2 retrogenes
retro_nleu_1047, retro_nleu_889,
Pongo abelii ENSPPYG00000014456 ortholog_one2one 2 retrogenes
retro_pabe_258, retro_pabe_3497,
Pan troglodytes ENSPTRG00000015796 ortholog_one2one 1 retrogene
retro_ptro_357,
Sorex araneus ENSSARG00000009996 ortholog_one2one 1 retrogene
retro_sara_148,
Sarcophilus harrisii ENSSHAG00000005704 ortholog_one2one 1 retrogene
retro_shar_242,
Tupaia belangeri ENSTBEG00000005595 ortholog_one2one 4 retrogenes
retro_tbel_2469, retro_tbel_2943, retro_tbel_4257, retro_tbel_791,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1572 83.39 94.03
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Download FASTA sequences of all ENSBTAG00000014874 retrocopies