Parental gene: | FYTTD1, ENSDNOG00000007807 |
| Aliases: | None |
| Description: | forty-two-three domain containing 1 [Source:HGNC Symbol;Acc:25407] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3916:80081..176571(+) |
>ENSDNOG00000007807
ATGAACCGGTTTGGTACCCGGTTGGTGGGAGCCACGGCGGCTCCGGCGTTGCCGACGAAAACCCGCAGCAACGAAAACCT
GGACAAAATCGATATGTCTTTGGATGATATAATTAAAAATCGAAAGGAAGGAAAGAAGCAGAATTTTCCAAGACTAAATA
GAAGACTCCAGCAAAGTGGTACCCGGCAATTCAGAATGAGAATACGATGGGGAATCCAACAGAATTCTGGTTTTGGTAAG
AATAATCTGGGTCGTAGAGGAAGAATAATGCCTGGAAAGAGACGTCCTTATGGGGTTATCACTGGCCTTGCTGCTAGGAA
AGCAACTGGAATTAGAAAAGGAATTAGTCCTATGAATCGACCACCTCTGAGTGATAAGAATATAGAGCGATATTTTCCTG
TGTTAAAAAGGAAGGCAAACCTTCTGAGACAAAATGAAGTGCAGAGGAAACCAGTTGCGGTTCTCAAGAGACCTAACCAA
TTAAACAGAAAAAGTAACATTCCAGCCAATTTTACCAGAAGTGGAAATAAATTAAGCCATCAGAAAGACACACGTCAGGC
AACTTTTCTTTTTAGAAGAGGCCTAAAGGTTCAGGCCCAGTTGAACACAGAACAACTGCTAGACGATGTAGTAGCAAAGA
GAACTCGTCAATGGCGGACTTCTACCACAAATGGAGGAATTTTGACTGTATCCATTGACAATCCTGGAGCAGTGCAGTGC
CCTGTAACTCAGAAACCAAGATTAACTCGTACTTCTGTGCCCTCATTCTTGGCAAAGCGGGAGCAGTCTGATATAAAGAA
AGTTCCTAAAGGTGTCCCCCTACAATTTGACATAAATAGTGTTGGAAAACAGACTTTGAGTGAGTTTGGGATCATGAAGG
AACAAAGAACTACTCCTATGTTCAACAAAGGAATAAGCAGCATTGTAACTGTGGAATAA
ATGAACCGGTTTGGTACCCGGTTGGTGGGAGCCACGGCGGCTCCGGCGTTGCCGACGAAAACCCGCAGCAACGAAAACCT
GGACAAAATCGATATGTCTTTGGATGATATAATTAAAAATCGAAAGGAAGGAAAGAAGCAGAATTTTCCAAGACTAAATA
GAAGACTCCAGCAAAGTGGTACCCGGCAATTCAGAATGAGAATACGATGGGGAATCCAACAGAATTCTGGTTTTGGTAAG
AATAATCTGGGTCGTAGAGGAAGAATAATGCCTGGAAAGAGACGTCCTTATGGGGTTATCACTGGCCTTGCTGCTAGGAA
AGCAACTGGAATTAGAAAAGGAATTAGTCCTATGAATCGACCACCTCTGAGTGATAAGAATATAGAGCGATATTTTCCTG
TGTTAAAAAGGAAGGCAAACCTTCTGAGACAAAATGAAGTGCAGAGGAAACCAGTTGCGGTTCTCAAGAGACCTAACCAA
TTAAACAGAAAAAGTAACATTCCAGCCAATTTTACCAGAAGTGGAAATAAATTAAGCCATCAGAAAGACACACGTCAGGC
AACTTTTCTTTTTAGAAGAGGCCTAAAGGTTCAGGCCCAGTTGAACACAGAACAACTGCTAGACGATGTAGTAGCAAAGA
GAACTCGTCAATGGCGGACTTCTACCACAAATGGAGGAATTTTGACTGTATCCATTGACAATCCTGGAGCAGTGCAGTGC
CCTGTAACTCAGAAACCAAGATTAACTCGTACTTCTGTGCCCTCATTCTTGGCAAAGCGGGAGCAGTCTGATATAAAGAA
AGTTCCTAAAGGTGTCCCCCTACAATTTGACATAAATAGTGTTGGAAAACAGACTTTGAGTGAGTTTGGGATCATGAAGG
AACAAAGAACTACTCCTATGTTCAACAAAGGAATAAGCAGCATTGTAACTGTGGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 22 .56 RPM |
| SRP012922_cerebellum | 20 .62 RPM |
| SRP012922_heart | 13 .69 RPM |
| SRP012922_kidney | 13 .96 RPM |
| SRP012922_liver | 8 .82 RPM |
| SRP012922_lung | 35 .28 RPM |
| SRP012922_quadricep_muscle | 39 .98 RPM |
| SRP012922_spleen | 34 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014874 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000029695 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000002881 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016488 | ortholog_one2one | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000011463 | ortholog_one2one | 2 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000001433 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000700 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000122068 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000011665 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006626 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015547 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000014456 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000015796 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000009996 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000005704 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005595 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_442 | 79.12 | 78.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_570 | 72.19 | 58.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1010 | 54.87 | 68.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_1224 | 72.94 | 68.27 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_1311 | 72.32 | 69.55 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_2013 | 77.08 | 90.71 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000007807 retrocopies