Parental gene: | C8H4orf27, ENSBTAG00000020132 |
| Aliases: | C8H4orf27, C4orf27 |
| Description: | UPF0609 protein C4orf27 homolog [Source:UniProtKB/Swiss-Prot;Acc:A2VDY4] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 8:1507916..1533257(-) |
>ENSBTAG00000020132
ATGGTGGGCGGTGGCGCGAAGCGTAGACTCCGCGGAGAGGGGCCGCAGTGTGAAAAACCGGTCGATATGAAGAAGAGTAA
GTCCTGTGAAGCTGACGTGCCCGGTGACCTTCGAAAAGAGGTGGAAAGCCATTACAGGCTTCCTCTGCCTGAAGATTTCT
ACCACTTCTGGAGGTTCTGCGAAGGACTTGACCCTGAACAGCCAGCTGATTCACTATCTGCAAGCCTTGGACTTCGATTA
GTGGGTCCTTATGATATCCTTGCCGGAAAACATAAAATAAAGAAAAAATCAGCAAGCTTGAATTTTAATCTTCACTGGAG
ATTTTACTATGATCCTCCTGAGTTCCAGACCATTATTATTGGAGACAGTAAAACTCAATTCCACATGGGGTATTTCAGGG
ATTCTCCTGATGAACTTCCTGTATTTGTCGGTACAAACGAAGCAAAGAAAAATTGTATAATTGTTCAAAGTGGAGATAAT
GTGTTTGCTGCAGTCAAATTATTTTTGATGAAAAAACTTAAAGAAGTAACAGATAAGAAGAAAAGTAGTCTCTTGAAAAC
CATAGATGAGAAACTCACAGAAGCAGCCAGAGAACTGGGGTTCTCCCTGGAGCAGAGAACTGTGAGGATGAAGCAGAGAG
ACAAGAAAGTGGTGACAAAGACCTTTCATGGGGCAGGCTTGGTTGTCCCAGTGGATAAAAATGATGTTGGATACAGAGAG
CTCCCTGAAACGGATGCCAGCCTCAGGAGAATCTGCGGGACAATTGTGGAGGCCCCGAGCGACGCCGACAGACTGCAGGC
CTTTGCCCCCGTCCAGGAGATGATGACCTACGTGCAGTTTGCTAACGATGAGTGCGACTATGGGATGGGGCTGGAGCTGG
GACTGGACCTCTTCTGCCATGGCTCCCACTATTTTCATAAAGTTGCTGGCCAGCTTTTACCTCTGGCATATAATCTGCTG
AAGAGGAATCTCTTTGCGGAAATTATTGAAGCTCATCTAGCAAACAGGAGCCAAGATGACGTGGACCAGCTCGCAGCATG
A
ATGGTGGGCGGTGGCGCGAAGCGTAGACTCCGCGGAGAGGGGCCGCAGTGTGAAAAACCGGTCGATATGAAGAAGAGTAA
GTCCTGTGAAGCTGACGTGCCCGGTGACCTTCGAAAAGAGGTGGAAAGCCATTACAGGCTTCCTCTGCCTGAAGATTTCT
ACCACTTCTGGAGGTTCTGCGAAGGACTTGACCCTGAACAGCCAGCTGATTCACTATCTGCAAGCCTTGGACTTCGATTA
GTGGGTCCTTATGATATCCTTGCCGGAAAACATAAAATAAAGAAAAAATCAGCAAGCTTGAATTTTAATCTTCACTGGAG
ATTTTACTATGATCCTCCTGAGTTCCAGACCATTATTATTGGAGACAGTAAAACTCAATTCCACATGGGGTATTTCAGGG
ATTCTCCTGATGAACTTCCTGTATTTGTCGGTACAAACGAAGCAAAGAAAAATTGTATAATTGTTCAAAGTGGAGATAAT
GTGTTTGCTGCAGTCAAATTATTTTTGATGAAAAAACTTAAAGAAGTAACAGATAAGAAGAAAAGTAGTCTCTTGAAAAC
CATAGATGAGAAACTCACAGAAGCAGCCAGAGAACTGGGGTTCTCCCTGGAGCAGAGAACTGTGAGGATGAAGCAGAGAG
ACAAGAAAGTGGTGACAAAGACCTTTCATGGGGCAGGCTTGGTTGTCCCAGTGGATAAAAATGATGTTGGATACAGAGAG
CTCCCTGAAACGGATGCCAGCCTCAGGAGAATCTGCGGGACAATTGTGGAGGCCCCGAGCGACGCCGACAGACTGCAGGC
CTTTGCCCCCGTCCAGGAGATGATGACCTACGTGCAGTTTGCTAACGATGAGTGCGACTATGGGATGGGGCTGGAGCTGG
GACTGGACCTCTTCTGCCATGGCTCCCACTATTTTCATAAAGTTGCTGGCCAGCTTTTACCTCTGGCATATAATCTGCTG
AAGAGGAATCTCTTTGCGGAAATTATTGAAGCTCATCTAGCAAACAGGAGCCAAGATGACGTGGACCAGCTCGCAGCATG
A
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 8 .41 RPM |
| SRP017611_kidney | 10 .37 RPM |
| SRP017611_liver | 3 .62 RPM |
| ERP005899_muscle | 9 .77 RPM |
| ERP005899_liver | 10 .02 RPM |
| SRP030211_testis | 39 .78 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000013735 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000003090 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017052 | ortholog_one2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001481 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000009751 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_611 | 93.66 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000020132 retrocopies