Parental gene:

BT.88309, ENSBTAG00000020316

Aliases:AP2B1, CLAPB1
Description:AP-2 complex subunit beta [Source:RefSeq peptide;Acc:NP_001068593]
Organism:Cow (Bos taurus)
Coordinates:19:15026369..15076211(-)


>ENSBTAG00000020316
ATGACTGACTCTAAGTACTTCACAACCAATAAAAAAGGAGAAATCTTTGAATTAAAGGCTGAACTCAACAATGAAAAGAA
AGAAAAGAGGAAGGAGGCTGTGAAGAAAGTGATTGCTGCTATGACTGTGGGGAAAGACGTTAGCTCTCTCTTTCCAGATG
TAGTGAACTGTATGCAGACGGATAATCTGGAACTGAAGAAGCTTGTGTATCTCTACTTGATGAACTATGCCAAGAGTCAG
CCAGACATGGCCATCATGGCTGTCAACAGCTTTGTGAAGGATTGTGAAGATCCCAATCCTCTGATTCGAGCTTTGGCAGT
CAGAACCATGGGGTGCATCCGGGTGGACAAGATAACAGAGTATCTCTGTGAGCCCCTCCGCAAGTGCTTAAAGGATGAAG
ATCCCTACGTCCGGAAGACAGCAGCAGTCTGCGTGGCAAAACTCCATGACATCAATGCCCAGATGGTGGAAGATCAGGGA
TTTCTGGATTCTCTGCGGGATCTCATAGCAGATTCAAATCCAATGGTGGTGGCTAATGCTGTAGCAGCACTATCTGAAAT
CAGTGAATCTCACCCCAACAGCAACTTACTCGATCTGAATCCACAGAACATTAATAAGCTACTGACAGCCCTGAATGAGT
GCACCGAATGGGGCCAGATTTTCATCCTGGACTGCTTATCTAATTACAATCCTAAAGATGACCGGGAGGCTCAGAGCATC
TGTGAGCGGGTAACTCCCCGGTTATCTCATGCCAACTCAGCAGTGGTGCTTTCAGCAGTAAAAGTCCTAATGAAATTTTT
AGAGTTGCTACCCAAGGAGTCTGACTACTACAATATGCTGCTGAAGAAGTTGGCCCCTCCACTTGTCACTTTGCTGTCTG
GGGAGCCAGAGGTGCAGTACGTCGCCCTGAGGAACATCAACCTAATTGTTCAGAAAAGGCCTGAAATCTTGAAGCAGGAA
ATAAAAGTTTTCTTTGTGAAGTACAATGATCCCATCTATGTGAAACTAGAGAAGTTGGACATCATGATTCGTTTGGCATC
CCAAGCCAACATTGCTCAGGTTCTGGCTGAACTGAAAGAGTATGCCACAGAGGTGGATGTTGACTTTGTGCGCAAAGCTG
TGCGAGCCATTGGGCGGTGTGCCATCAAGGTGGAGCAATCTGCAGAGCGCTGTGTGAGCACGTTGCTTGATCTCATCCAA
ACCAAAGTAAATTATGTGGTCCAAGAGGCGATTGTTGTCATCAGGGACATTTTCCGCAAATATCCCAACAAATACGAAAG
TATCATTGCCACACTGTGTGAGAACTTAGATTCTCTGGATGAGCCAGACGCTCGAGCAGCTATGATTTGGATTGTGGGAG
AATATGCTGAAAGAATTGACAATGCCGATGAGTTACTAGAGAGCTTCCTGGAGGGTTTTCATGATGAAAGCACGCAAGTG
CAGCTCACTCTGCTCACTGCCATAGTGAAGCTGTTTCTCAAGAAACCGTCAGAAACACAGGAGCTGGTACAGCAGGTCTT
GAGTTTGGCAACACAGGATTCTGATAATCCTGACCTTCGAGACCGGGGCTATATTTATTGGCGCCTTCTCTCAACTGATC
CTGTCACAGCTAAAGAAGTAGTCTTGTCTGAAAAGCCACTGATTTCTGAGGAGACAGATCTTATTGAGCCAACTCTACTG
GATGAGCTAATCTGCCACATTGGTTCTTTGGCCTCAGTGTACCATAAGCCGCCCAATGCTTTTGTGGAAGGAAGTCATGG
AATCCATCGCAAACACTTGCCAATACATCATGGG

Library Parental gene expression (RPM)
SRP017611_brain 122 .06 RPM
SRP017611_kidney 95 .96 RPM
SRP017611_liver 19 .18 RPM
ERP005899_muscle 48 .94 RPM
ERP005899_liver 4 .04 RPM
SRP030211_testis 706 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010864 ortholog_one2one 1 retrogene
retro_chof_2310,
Callithrix jacchus ENSCJAG00000014853 possible_ortholog 1 retrogene
retro_cjac_1850,
Myotis lucifugus ENSMLUG00000002837 possible_ortholog 1 retrogene
retro_mluc_2443,
Mustela putorius furo ENSMPUG00000014910 ortholog_one2one 1 retrogene
retro_mputfur_704,
Nomascus leucogenys ENSNLEG00000013939 possible_ortholog 2 retrogenes
retro_nleu_1925, retro_nleu_2554,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1675 89.04 50.17
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Download FASTA sequences of all ENSBTAG00000020316 retrocopies