Parental gene:

CNN2, ENSBTAG00000020764

Aliases:None
Description:Calponin-2 [Source:UniProtKB/Swiss-Prot;Acc:Q3SYU6]
Organism:Cow (Bos taurus)
Coordinates:7:45159980..45162941(+)


>ENSBTAG00000020764
CTGCAGTCCAAATATGACCCTCAGAAGGAGGCGGAGCTCCGAAGCTGGATTGAGGGACTCACTGGTCTCTCCGTTGGCCC
AGACTTCCAGAAGGGTCTGAAGGATGGGATCATATTGTGCACACTCATGAATAAGCTGCAGCCAGGCTCAGTCCCTAAGA
TCAACCGCTCCATGCAGAACTGGCACCAGCTAGAAAACCTCTCCAACTTCATCAAGGCCATGGTGAGCTACGGCATGAAT
CCTGTTGACCTGTTTGAGGCCAACGACCTGTTTGAAAGTGGGAACTTGACTCAGGTGCAGGTGTCTCTTCTTGCCCTGGC
TGGGAAGGCCAAGACAAAGGGGTTGCAGAGTGGTGTGGACATTGGCGTCAAATACTCAGAGAAGCAGGAGCGAAACTTTG
ATGATGCCACCATGAAGGCGGGCCAGTGCGTCATTGGGCTCCAGATGGGCACCAACAAATGTGCCAGCCAGTCCGGTATG
ACAGCTTATGGCACCAGACGGCATCTGTATGACCCCAAAAACCATATCCTGCCCCCCATGGACCACTCGACCATCAGCCT
CCAGATGGGCACAAATAAGTGTGCCAGCCAGGTGGGCATGACGGCTCCAGGGACCCGGCGGCACATTTATGACACAAAGC
TGGGGACAGACAAATGTGATAATTCCTCCATGTCCCTGCAGATGGGCTACACACAGGGTGCCAACCAGAGTGGTCAGGTC
TTTGGCCTGGGCCGGCAGATATACGACCCCAAGTACTGCCCTCAAGGCCCAGCGGCCGACGGGGCTCCAGCAGCTGCTGG
AGATGGCCCAGGCCCAGGGGAACCCTCAGAGTGTCCTCCCTACTACCAGGAGGAGGCAGGCTACTAA

Library Parental gene expression (RPM)
SRP017611_brain 3 .97 RPM
SRP017611_kidney 32 .24 RPM
SRP017611_liver 4 .30 RPM
ERP005899_muscle 28 .35 RPM
ERP005899_liver 3 .60 RPM
SRP030211_testis 17 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002068 within_species_paralog 1 retrogene
retro_btau_1701,
Bos taurus ENSBTAG00000020345 within_species_paralog 1 retrogene
retro_btau_1211,
Gorilla gorilla ENSGGOG00000028153 possible_ortholog 9 retrogenes
retro_ggor_1199, retro_ggor_1271, retro_ggor_1555, retro_ggor_1612, retro_ggor_1646, retro_ggor_1922, retro_ggor_2370, retro_ggor_305, retro_ggor_762,
Macaca mulatta ENSMMUG00000015306 possible_ortholog 1 retrogene
retro_mmul_1131,
Pongo abelii ENSPPYG00000009302 possible_ortholog 12 retrogenes
retro_pabe_1299, retro_pabe_1397, retro_pabe_1838, retro_pabe_1920, retro_pabe_2171, retro_pabe_2249, retro_pabe_2900, retro_pabe_3512, retro_pabe_3515, retro_pabe_3543, retro_pabe_3823, retro_pabe_407,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_612 82.21 87.15
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Download FASTA sequences of all ENSBTAG00000020764 retrocopies