Parental gene: | ESRP1, ENSBTAG00000021838 |
| Aliases: | ESRP1, RBM35A |
| Description: | epithelial splicing regulatory protein 1 [Source:RefSeq peptide;Acc:NP_001179931] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 14:71945028..72003342(-) |
>ENSBTAG00000021838
ATGACGGCGTCTCCGGATTACTTGGTGGTGCTCTTCGGAATCACGGCTGGGGCCACCGGGGCCAAGCTGGGCTCGGACGA
GAAGGAGCTGATCCTGCTCTTATGGAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGACAGTTGCACGAAGTACTAGTTA
GACCGGATCACTTGGAGCTGACGGAGGACTGCAAAGAAGAAACGAAGCTCGACGCCGAGAGCCTGTCCTCGGCGCCGCAG
CTGGACCAAGCGCTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTGAATATTGGGGTAGGAACCTCCTTCTGTCTCTG
TACCGACGGGCAGCTTCATGTCAGGCAAATTCTGCATCCTGAGGCTTCTAAGAAGAATGTATTATTGCCTGAATGCTTCT
ATTCCTTTTTTGATCTTCGAAAAGAATTCAAGAAGTGTTGCCCTGGTTCACCTGATATTGATAAACTGGATGTTGCAGCA
ATGACAGAGTGTTTAAATTTTGAGAAGAATAGTTCAGCCTCCCGGTATGGAGCATCTCAAGTTGAAGATATGGGAAATAT
AATCTTAGCAATGATTTCAGACCCTTATAATCACAGGTTTTCAGATCCAGAGAGAGTAAATTACAAATTTGAAAGTGGCA
CTTGCAGCAAGATGGAACTTATTGATGACAACACAGTAGTCAGGGCACGAGGTTTACCATGGCAGTCTTCGGATCAAGAT
ATTGCAAGATTCTTCAAAGGACTCAATATTGCCAAGGGCGGTGCAGCACTGTGTCTGAATGCCCAGGGTCGGAGGAACGG
AGAAGCCCTGGTTAGGTTTGTGAGCGAGGAGCACAGAGACCTAGCTCTGCAGAGACACAAGCACCACATGGGGAGCCGGT
ACATCGAGGTTTACAAAGCAACAGGTGAAGATTTTCTTAAAATTGCTGGTGGTACATCCAATGAGGTGGCCCAGTTTCTC
TCCAAGGAAAACCAAGTCATTGTCCGCATGCGGGGGCTCCCCTTCACGGCCACGGCTGATGAAGTGGTGGCCTTCTTTGG
ACAGCATTGCCCCATCACTGGGGGGAAGGAAGGCATCCTCTTTGTTACCTACCCGGATGGTAGGCCCACAGGGGATGCTT
TTGTCCTCTTTGCTTGCGAGGAATACGCACAGAACGCACTGAGGAAGCATAAAGACTTGTTGGGTAAAAGATACATCGAA
CTCTTCCGGAGCACAGCAGCTGAAGTTCAGCAGGTGCTGAATCGATTCTCCTCGGCTCCTCTCATTCCACTTCCAACCCC
TCCCATTATTCCAGTACTACCTCAGCAGTTTGTGCCCCCTACAAACATTAGAGACTGTATACGCCTTCGAGGTCTTCCCT
ATGCAGCCACAATTGAGGATATCCTTGACTTCCTGGGGGAGTTTTCCACCGATATCCGAACTCATGGGGTCCACATGGTA
TTGAACCACCAGGGCCGCCCGTCAGGAGATGCCTTTATCCAGATGAAGTCTGCGGACAGAGCATTTATGGCTGCACAGAA
GTGTCATAAAAAAACCATGAAGGACAGATATGTTGAAGTCTTTCAGTGTTCAGCTGAGGAGATGAACTTTGTGTTAATGG
GGGGCACTTTAAATCGAAATGGCTTATCCCCACCGCCATGCCTGTCCCCTCCCTCCTACACATTTCCAGCTCCCGCAGCA
GTTATTCCTACTGAAGCTGCCATTTACCAGCCCTCAGTGCTCCTGAACCCGCGAGCGCTGCAGCCCTCCACAGCGTACTA
CCCCGCGGGCACCCAGCTCTTCATGAACTACACGGCGTACTACCCCAGCCCCCCAGGTTCGCCCAATAGTCTTGGCTACT
TCCCTACAGCTGCTAATCTTAGCGGTGTCCCTCCACAGCCTGGCACGGTGGTCAGAATGCAGGGCCTGGCCTACAATACT
GGAGTTAAGGAAATTCTTAACTTCTTCCAAGGTTACCAGTATGCAACCGAGGATGGACTTGTACACACAAGTGACCAGGC
CAGGACTCTATCCAAAGAATGGGTTTGTATTTAA
ATGACGGCGTCTCCGGATTACTTGGTGGTGCTCTTCGGAATCACGGCTGGGGCCACCGGGGCCAAGCTGGGCTCGGACGA
GAAGGAGCTGATCCTGCTCTTATGGAAAGTCGTGGATCTGGCCAACAAGAAGGTGGGACAGTTGCACGAAGTACTAGTTA
GACCGGATCACTTGGAGCTGACGGAGGACTGCAAAGAAGAAACGAAGCTCGACGCCGAGAGCCTGTCCTCGGCGCCGCAG
CTGGACCAAGCGCTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTGAATATTGGGGTAGGAACCTCCTTCTGTCTCTG
TACCGACGGGCAGCTTCATGTCAGGCAAATTCTGCATCCTGAGGCTTCTAAGAAGAATGTATTATTGCCTGAATGCTTCT
ATTCCTTTTTTGATCTTCGAAAAGAATTCAAGAAGTGTTGCCCTGGTTCACCTGATATTGATAAACTGGATGTTGCAGCA
ATGACAGAGTGTTTAAATTTTGAGAAGAATAGTTCAGCCTCCCGGTATGGAGCATCTCAAGTTGAAGATATGGGAAATAT
AATCTTAGCAATGATTTCAGACCCTTATAATCACAGGTTTTCAGATCCAGAGAGAGTAAATTACAAATTTGAAAGTGGCA
CTTGCAGCAAGATGGAACTTATTGATGACAACACAGTAGTCAGGGCACGAGGTTTACCATGGCAGTCTTCGGATCAAGAT
ATTGCAAGATTCTTCAAAGGACTCAATATTGCCAAGGGCGGTGCAGCACTGTGTCTGAATGCCCAGGGTCGGAGGAACGG
AGAAGCCCTGGTTAGGTTTGTGAGCGAGGAGCACAGAGACCTAGCTCTGCAGAGACACAAGCACCACATGGGGAGCCGGT
ACATCGAGGTTTACAAAGCAACAGGTGAAGATTTTCTTAAAATTGCTGGTGGTACATCCAATGAGGTGGCCCAGTTTCTC
TCCAAGGAAAACCAAGTCATTGTCCGCATGCGGGGGCTCCCCTTCACGGCCACGGCTGATGAAGTGGTGGCCTTCTTTGG
ACAGCATTGCCCCATCACTGGGGGGAAGGAAGGCATCCTCTTTGTTACCTACCCGGATGGTAGGCCCACAGGGGATGCTT
TTGTCCTCTTTGCTTGCGAGGAATACGCACAGAACGCACTGAGGAAGCATAAAGACTTGTTGGGTAAAAGATACATCGAA
CTCTTCCGGAGCACAGCAGCTGAAGTTCAGCAGGTGCTGAATCGATTCTCCTCGGCTCCTCTCATTCCACTTCCAACCCC
TCCCATTATTCCAGTACTACCTCAGCAGTTTGTGCCCCCTACAAACATTAGAGACTGTATACGCCTTCGAGGTCTTCCCT
ATGCAGCCACAATTGAGGATATCCTTGACTTCCTGGGGGAGTTTTCCACCGATATCCGAACTCATGGGGTCCACATGGTA
TTGAACCACCAGGGCCGCCCGTCAGGAGATGCCTTTATCCAGATGAAGTCTGCGGACAGAGCATTTATGGCTGCACAGAA
GTGTCATAAAAAAACCATGAAGGACAGATATGTTGAAGTCTTTCAGTGTTCAGCTGAGGAGATGAACTTTGTGTTAATGG
GGGGCACTTTAAATCGAAATGGCTTATCCCCACCGCCATGCCTGTCCCCTCCCTCCTACACATTTCCAGCTCCCGCAGCA
GTTATTCCTACTGAAGCTGCCATTTACCAGCCCTCAGTGCTCCTGAACCCGCGAGCGCTGCAGCCCTCCACAGCGTACTA
CCCCGCGGGCACCCAGCTCTTCATGAACTACACGGCGTACTACCCCAGCCCCCCAGGTTCGCCCAATAGTCTTGGCTACT
TCCCTACAGCTGCTAATCTTAGCGGTGTCCCTCCACAGCCTGGCACGGTGGTCAGAATGCAGGGCCTGGCCTACAATACT
GGAGTTAAGGAAATTCTTAACTTCTTCCAAGGTTACCAGTATGCAACCGAGGATGGACTTGTACACACAAGTGACCAGGC
CAGGACTCTATCCAAAGAATGGGTTTGTATTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 0 .09 RPM |
| SRP017611_kidney | 15 .23 RPM |
| SRP017611_liver | 0 .30 RPM |
| ERP005899_muscle | 62 .34 RPM |
| ERP005899_liver | 0 .87 RPM |
| SRP030211_testis | 2 .86 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009389 | other_paralog | 1 retrogene | |
| Bos taurus | ENSBTAG00000014316 | other_paralog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000020513 | other_paralog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000009305 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_847 | 98.17 | 96.45 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000021838 retrocopies