Parental gene:

BT.92467, ENSBTAG00000034225

Aliases:None
Description:None
Organism:Cow (Bos taurus)
Coordinates:28:566182..584480(-)


>ENSBTAG00000034225
ATGAAACGGGTCCGCACGGAGCAGATCCAGATGGCCGTGTCCTGCTACCTCAAACGCCGGCAGTACGGGGATGCGGACGG
TCCGAAGCAAATACTGCGGCTATCGCAGAGCACTGAGGAGATGGCCGCCAGCCTCACAGTCCAATCAGAATCTGGTTGTG
CCAACATAGTGTCCGCAGCCCCTTGCCAGGCAGAGCCCCAGCAATATGAAGTACAGTTCGGACGGCTGCGGAATTTTCTC
ACCGATTCTGACTCCCAGCACAGCCATGAAGTGATGCCTCTCCTCTACCCTCTCTTTGTCTACCTCCATCTCACCCTGAT
CCAGAACAGTCCGAAGAGCACAGTGGAAAGCTTTTACAGCCGCTTCCATGGAATGTTTCTGCAGAATGCCAGCCAGAAGG
ATGTTATCGAGCAGCTCCAGACCACTCAGACCATCCAGGACATCCTGTCTAACTTCCGGCTGCGAGCCTTCCTGGACAAC
AAATACGTGGTTCGTCTGCAGGAAGACAGCTACAACTACCTTCTCCGCTACCTCCAGAGTGACAACAACACCGCGCTGTG
CAGGATCCTCGCCTGGCACATCCATCTGGACGTGCAGCCCGCCAAGAGGACAGACTACCAGCTCTACACCAGTGGTGGTT
CCTTCCGAGGCGAGGGTGGCGGCCTGGAGCCCGCCGACATGCCAGCGCCCATCCTGCAGAATGAGGCCGCGCTGGAGGAG
AGCATCAAGCGCGTCAAGGACGGCCCCCCCTCCCTGACCACCATCTACTTCTATGCCTTCTACAACACAGAGCAGCTGCT
GAACACTGCAGAGGTCTCCCCGGACAGCAAGCTGCTTGCAGCAGGCTTTGACAACTCCTGTATAAAACTGTGGAGTCTGC
GTTCCAAGAAGTTAAAGTCCGAACCCCATCAAGTAGATGTGTCCCGCATCCACTTGGCTTGTGATTTCCTAGAGGAGGAG
GATGACGAGGACGACAACTTAGGCACAGAGATGAAGGTCCTGCGGGGACACTGTGGGCCAGTGTACAGCACCAGGTTCCT
CGCGGACAGCTCGGGGCTGCTCTCCTGCTCTGAAGACATGTCCATCAGGTACTGGGACCTGGGCAGCTTCACCAACACCG
TGCTGTACCAGGGCCACGCCTACCCCGTGTGGGACCTGGACATCAGCCCGCACAGCCTGTACTTCGCCAGCGCGTCCCAC
GACCGCACGGCCCGGCTGTGGTCATTTGATCGGACGTACCCGCTGCGAATCTACGCCGGGCACCTGGCAGACGTGGACTG
CGTCAAGTTCCACCCCAATTCAAACTACTTAGCCACGGGCTCAACCGACAAGACGGTGCGGCTGTGGAGCACTCAGCAGG
GGAACTCCGTGAGGCTCTTCACGGGCCACCGCGGCCCTGTGCTCTCCCTGGCTTTTTCCCCCAACGGTAAGTACCTGGCA
TCAGCAGGCGAGGACCAGCGGCTGAAGCTGTGGGACTTGGCATCCGGGACCCTCTACAAAGAGCTGCGGGGCCACACGGA
CAACATCACCAGCCTCACCTTCAGCCCAGACAGCAGCCTGGTCGCGTCTGCGTCCATGGACAACTCCGTGCGTGTCTGGG
ACATCAGAAGCTCACACTGTAGCACACCTGCCGATGGCTCATCCAGCGAGCTCGTGGGCGTCTACACCGGCCAGATGAGC
AATGTGCTGAGCGTGCAGTTCATGGCCTGCAACCTCCTGCTGGTGACTGGAATCACACAAGAAAATCAGGAACATTGA

Library Parental gene expression (RPM)
SRP017611_brain 12 .65 RPM
SRP017611_kidney 12 .80 RPM
SRP017611_liver 12 .76 RPM
ERP005899_muscle 11 .56 RPM
ERP005899_liver 4 .11 RPM
SRP030211_testis 33 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015944 within_species_paralog 1 retrogene
retro_btau_702,
Callithrix jacchus ENSCJAG00000010986 ortholog_one2one 1 retrogene
retro_cjac_4042,
Homo sapiens ENSG00000135801 ortholog_one2one 1 retrogene
retro_hsap_1750,
Gorilla gorilla ENSGGOG00000028544 ortholog_one2one 1 retrogene
retro_ggor_2253,
Pan troglodytes ENSPTRG00000002091 ortholog_one2one 1 retrogene
retro_ptro_1216,
Rattus norvegicus ENSRNOG00000018027 possible_ortholog 1 retrogene
retro_rnor_509,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1300 93.05 100.00
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Download FASTA sequences of all ENSBTAG00000034225 retrocopies