Parental gene: | Taf5l, ENSRNOG00000018027 |
| Aliases: | None |
| Description: | TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L [Source:RefSeq peptide;Acc:NP_001100912] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 19:67497410..67516350(-) |
>ENSRNOG00000018027
ATGAAACGAGTGCGCACGGAGCAGGTTCAGGTGGCAGTGTCCTGCTACCTCAAACGCCGGCAGTACGTGGACTCAGAAGG
CCCTTTGAAGCAAGGCCTGAGACTCTCACAGACCCCTGAGGAGATGGCGGCCAACCTCACAGTCCAATCAGAATCTGGTT
GTGCCAATGCGGTGTCTGCAGCCCCTTGCCAGGCAGAACCCCAGCAATATGAAGTACAGTTTGGACGACTGAGGAACTTT
CTCACTGATTCTGACTCCCAGTACAGCCATGAAGTTATGCCTCTCCTCTACCCTCTCTTTGTCTACCTCCACCTCAACCT
GGTCCAGAGTGGCCCCAAGAGCACCGTGGAAAGCTTCTATAGCCGCTTCCATGGAATGTTCCTGCAGAATGCAAGTCAGA
AGGACATCATCGAGCAACTGCAGACCACGCAGACCATCCAGGATATTCTGTCAAACTTCCAGCTTCGTGCATTCCTGGAC
AACAAGTATGTGGTCCGTCTCCAGGAAGATAGCTACAACTACCTTATCCGCTACCTCCAAAGCGACAACAACACTGCCCT
GTGCAAGGTGCTCGCCGTGCACATTCACTTGGACGTGCAGCCTGCTAAGAGGACAGACTACCAGCTGTATGCCAGTGGTG
GCTCCTCCCGCAGTGAAAGCAGCAGCCTGGAGCCACCAGATGTGCCCAACCCTATCCTGCAGAACGAGGCTGCCCTGGAG
GTCTTGCAGGAGAGTATCAAGCGGGTCAAGGATGGACCTCCCTCCCTCACCACCATCTGCTTCTACGCCTTCTATAACAC
AGAGCAGCTGCTGAATACCGCAGAGATCTCCTCTGACAGCAAACTGCTGGCTGCTGGGTTTGACAACTCCTGCATAAAGC
TCTGGAGCTTGCGGTCCAAAAAACTGAAGTCAGAGCCCCACTGTGTGGACACATCCCGTGTCCGGCTGGCTTGTGACACT
CTGGAGGAGGAGGAGAGCGAAGACGATGACGTAGGCACGGAAATGAAGATTCTGCGGGGACACTGTGGCCCAGTGTATAG
CACACGGTTCCTCGCGGACAGCTCAGGGCTGCTCTCTTGTTCTGAAGATATGTCCATCAGGTACTGGGACCTGGGGAGCT
TCACCAACACTGTGCTGTATCAGGGACATGCCTACCCTGTGTGGGACGTGGACATCAGCCCCTACAGCCTGTACTTTGCC
AGTGGGTCCCATGACCGTACCGCCAGGCTGTGGTCTTTTGATCGGACGTACCCGCTGAGGATATATGCGGGGCACCTGGC
AGATGTGGACTGTGTCAAATTCCACCCCAACTCAAACTACTTAGCTACTGGCTCCACTGACAAAACTGTTCGTCTATGGA
GTGCCCAGCAGGGGAACTCAGTGCGGCTTTTTACAGGTCACCGAGGCCCCGTGCTCTCCCTCTCCTTTTCTCCCAATGGT
AAGTACTTGGCATCTGCTGGTGAGGACCAGCGGTTAAAGTTGTGGGACTTGGCCTCTGGGACACTTTTTAAAGAACTGAG
AGGCCACACGGACAGCATCACCAGTCTGGCCTTTAGCCCGGACAGCGGTCTGATTGCTTCTGCCTCCATGGACAACTCTG
TACGCGTCTGGGACATCAGAAGCACGTGCTGCAACACACCAGCTGACGGCTCTTCTGGGGAGCTTGTGGGCGTGTACACT
GGGCAGATGAGCAACGTCCTGAGTGTACAGTTCATGGCCTGCAACCTCCTCCTAGTGACTGGAATCACACAAGAGAATCA
AGAACATTAA
ATGAAACGAGTGCGCACGGAGCAGGTTCAGGTGGCAGTGTCCTGCTACCTCAAACGCCGGCAGTACGTGGACTCAGAAGG
CCCTTTGAAGCAAGGCCTGAGACTCTCACAGACCCCTGAGGAGATGGCGGCCAACCTCACAGTCCAATCAGAATCTGGTT
GTGCCAATGCGGTGTCTGCAGCCCCTTGCCAGGCAGAACCCCAGCAATATGAAGTACAGTTTGGACGACTGAGGAACTTT
CTCACTGATTCTGACTCCCAGTACAGCCATGAAGTTATGCCTCTCCTCTACCCTCTCTTTGTCTACCTCCACCTCAACCT
GGTCCAGAGTGGCCCCAAGAGCACCGTGGAAAGCTTCTATAGCCGCTTCCATGGAATGTTCCTGCAGAATGCAAGTCAGA
AGGACATCATCGAGCAACTGCAGACCACGCAGACCATCCAGGATATTCTGTCAAACTTCCAGCTTCGTGCATTCCTGGAC
AACAAGTATGTGGTCCGTCTCCAGGAAGATAGCTACAACTACCTTATCCGCTACCTCCAAAGCGACAACAACACTGCCCT
GTGCAAGGTGCTCGCCGTGCACATTCACTTGGACGTGCAGCCTGCTAAGAGGACAGACTACCAGCTGTATGCCAGTGGTG
GCTCCTCCCGCAGTGAAAGCAGCAGCCTGGAGCCACCAGATGTGCCCAACCCTATCCTGCAGAACGAGGCTGCCCTGGAG
GTCTTGCAGGAGAGTATCAAGCGGGTCAAGGATGGACCTCCCTCCCTCACCACCATCTGCTTCTACGCCTTCTATAACAC
AGAGCAGCTGCTGAATACCGCAGAGATCTCCTCTGACAGCAAACTGCTGGCTGCTGGGTTTGACAACTCCTGCATAAAGC
TCTGGAGCTTGCGGTCCAAAAAACTGAAGTCAGAGCCCCACTGTGTGGACACATCCCGTGTCCGGCTGGCTTGTGACACT
CTGGAGGAGGAGGAGAGCGAAGACGATGACGTAGGCACGGAAATGAAGATTCTGCGGGGACACTGTGGCCCAGTGTATAG
CACACGGTTCCTCGCGGACAGCTCAGGGCTGCTCTCTTGTTCTGAAGATATGTCCATCAGGTACTGGGACCTGGGGAGCT
TCACCAACACTGTGCTGTATCAGGGACATGCCTACCCTGTGTGGGACGTGGACATCAGCCCCTACAGCCTGTACTTTGCC
AGTGGGTCCCATGACCGTACCGCCAGGCTGTGGTCTTTTGATCGGACGTACCCGCTGAGGATATATGCGGGGCACCTGGC
AGATGTGGACTGTGTCAAATTCCACCCCAACTCAAACTACTTAGCTACTGGCTCCACTGACAAAACTGTTCGTCTATGGA
GTGCCCAGCAGGGGAACTCAGTGCGGCTTTTTACAGGTCACCGAGGCCCCGTGCTCTCCCTCTCCTTTTCTCCCAATGGT
AAGTACTTGGCATCTGCTGGTGAGGACCAGCGGTTAAAGTTGTGGGACTTGGCCTCTGGGACACTTTTTAAAGAACTGAG
AGGCCACACGGACAGCATCACCAGTCTGGCCTTTAGCCCGGACAGCGGTCTGATTGCTTCTGCCTCCATGGACAACTCTG
TACGCGTCTGGGACATCAGAAGCACGTGCTGCAACACACCAGCTGACGGCTCTTCTGGGGAGCTTGTGGGCGTGTACACT
GGGCAGATGAGCAACGTCCTGAGTGTACAGTTCATGGCCTGCAACCTCCTCCTAGTGACTGGAATCACACAAGAGAATCA
AGAACATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .77 RPM |
| SRP017611_kidney | 3 .42 RPM |
| SRP017611_brain | 4 .96 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000034225 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000010986 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000135801 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000028544 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002091 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000012929 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_509 | 96.78 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000018027 retrocopies