Parental gene:

UBE2B, ENSCAFG00000001019

Aliases:None
Description:ubiquitin-conjugating enzyme E2B [Source:HGNC Symbol;Acc:12473]
Organism:Dog (Canis familiaris)
Coordinates:11:22525082..22539965(+)


>ENSCAFG00000001019
ATGTCGACTCCGGCCCGGAGGAGGCTCATGCGGGATTTCAAGCGATTGCAAGAGGACCCACCTGTGGGTGTCAGTGGCGC
ACCATCTGAAAACAACATTATGCAGTGGAATGCAGTTATATTTGGACCAGAAGGGACACCCTTTGAAGATGGTACTTTTA
AACTAGTAATAGAATTTTCTGAAGAGTATCCAAATAAACCACCAACTGTTAGGTTTTTATCCAAAATGTTTCATCCAAAT
GTGTATGCTGATGGTAGCATATGTTTAGATATCCTTCAGAATCGATGGAGTCCAACATATGATGTATCTTCTATCTTAAC
ATCAATTCAGTCTCTGCTGGATGAACCGAATCCAAACAGTCCAGCCAATAGCCAGGCAGCACAGCTTTATCAGGAAAACA
AACGAGAATATGAGAAAAGAGTTTCGGCCATTGTTGAACAAAGCTGGAATGATTCATAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 33 .31 RPM
SRP017611_brain 22 .87 RPM
SRP017611_kidney 36 .72 RPM
SRP017611_liver 7 .40 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000002525 ortholog_one2one 1 retrogene
retro_dord_646,
Echinops telfairi ENSETEG00000006522 ortholog_one2many 2 retrogenes
retro_etel_1531, retro_etel_771,
Macropus eugenii ENSMEUG00000004740 ortholog_one2many 1 retrogene
retro_meug_718,
Myotis lucifugus ENSMLUG00000012910 ortholog_one2one 4 retrogenes
retro_mluc_1319, retro_mluc_1520, retro_mluc_2216, retro_mluc_478,
Monodelphis domestica ENSMODG00000014209 ortholog_one2many 1 retrogene
retro_mdom_1218,
Mus musculus ENSMUSG00000020390 ortholog_one2one 1 retrogene
retro_mmus_736,
Ochotona princeps ENSOPRG00000006668 ortholog_one2one 1 retrogene
retro_opri_1186,
Pteropus vampyrus ENSPVAG00000012430 ortholog_one2many 1 retrogene
retro_pvam_141,
Sarcophilus harrisii ENSSHAG00000016143 ortholog_many2many 2 retrogenes
retro_shar_12, retro_shar_173,
Tupaia belangeri ENSTBEG00000010294 ortholog_one2one 26 retrogenes
retro_tbel_2107, retro_tbel_2133, retro_tbel_2137, retro_tbel_2157, retro_tbel_2285, retro_tbel_2286, retro_tbel_2287, retro_tbel_2288, retro_tbel_2385, retro_tbel_2616, retro_tbel_2945, retro_tbel_3251, retro_tbel_3252, retro_tbel_3253, retro_tbel_3284, retro_tbel_3878, retro_tbel_4086, retro_tbel_4087, retro_tbel_4238, retro_tbel_4289, retro_tbel_4443, retro_tbel_4585, retro_tbel_4680, retro_tbel_4684, retro_tbel_4685, retro_tbel_4693,
Tarsius syrichta ENSTSYG00000011148 ortholog_one2one 2 retrogenes
retro_tsyr_151, retro_tsyr_553,
Tursiops truncatus ENSTTRG00000016861 ortholog_one2many 1 retrogene
retro_ttru_700,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_216 89.26 98.03
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2. retro_cfam_2099 88.89 52.63
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Download FASTA sequences of all ENSCAFG00000001019 retrocopies