Parental gene:

C16orf87, ENSCAFG00000003679

Aliases:None
Description:chromosome 16 open reading frame 87 [Source:HGNC Symbol;Acc:33754]
Organism:Dog (Canis familiaris)
Coordinates:15:8290029..8350813(+)


>ENSCAFG00000003679
ATGTCTGCGAGTCGAGCCAAGAAAGTGAAGATGGCCACCAAGTCGTGCCCCGAGTGCGACCAGCAGGTTCCTGTTGCATG
TAAATCGTGTCCCTGTGGTTACATATTTATTAGCAGAAAACTTTTAAATGCAAAACACCCAGAGAAATCACCACCTTCTA
CAGAGAACAAGCATGAGGCCAAGAGGAGGCGAACAGAGAGAGTTAGGCGAGAGAAGATAAATTCTACAGTAAATAAGGAT
TTAGAAAACAGAAAGAGGTCTCGAAGTAACAGCCATTCAGATCATATCAGACGAGGAAGAGGAAGACCTAAAACTGCATC
TGCCAAAAAACATGAGGAAGAAAGAGAGAAACAGGAAAAGGAAATTGACATCTATGCTAACCTCTCTGATGAAAAGGCTT
TCGTGTTTTCAGTCGCCTTGGCAGAAATAAATAGAAAAATTATCAATCAAAGACTTATTCTCTGA

Library Parental gene expression (RPM)
SRP017611_brain 4 .84 RPM
SRP017611_kidney 3 .04 RPM
SRP017611_liver 0 .80 RPM
SRP012049_cerebellum 3 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000010228 ortholog_one2one 2 retrogenes
retro_cpor_1197, retro_cpor_1228,
Dasypus novemcinctus ENSDNOG00000006412 ortholog_one2one 2 retrogenes
retro_dnov_1512, retro_dnov_2463,
Tupaia belangeri ENSTBEG00000013316 ortholog_one2many 2 retrogenes
retro_tbel_3011, retro_tbel_305,
Tarsius syrichta ENSTSYG00000008921 ortholog_one2one 1 retrogene
retro_tsyr_1758,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1054 100.00 100.00
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Download FASTA sequences of all ENSCAFG00000003679 retrocopies