Parental gene: | C16ORF87, ENSCPOG00000010228 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_33:6848513..6872336(+) |
>ENSCPOG00000010228
AAAGTGAAGATGGCTACCAAGTCTTGCTCCGAGTGCGACCAACAGGTTCCTGTTGCATGTAAATCATGTCCCTGTGGTTA
CATATTTATTAGCAGAAAACTTTTAAATGCAAAACACTCAGAGAAATCACCATCTTCTACAGAAAACAAGCATGAGGCCA
AGAGGAGGCGAACAGAGAGAGTTAGGAGAGAGAAGATAAATTCTACAGTAAATAAAGATTTAGAAAACAGAAAGAGGTCT
CGAAGTAACAGCCATTCAGATCATATCAGACGAGGAAGAGGAAGACCTAAAAGTGCATCTGCCAAAAAACATGAGGAAGA
AAGAGAGAAACAGGAAAAGGAAATAGACATCTATGCTAACCTCTCTGATGAAAAGGCTTTCGTGTTTTCAGTCGCCTTGG
CAGAAATAAATAGAAAAATTATCAATCAAAGACTTATTCTC
AAAGTGAAGATGGCTACCAAGTCTTGCTCCGAGTGCGACCAACAGGTTCCTGTTGCATGTAAATCATGTCCCTGTGGTTA
CATATTTATTAGCAGAAAACTTTTAAATGCAAAACACTCAGAGAAATCACCATCTTCTACAGAAAACAAGCATGAGGCCA
AGAGGAGGCGAACAGAGAGAGTTAGGAGAGAGAAGATAAATTCTACAGTAAATAAAGATTTAGAAAACAGAAAGAGGTCT
CGAAGTAACAGCCATTCAGATCATATCAGACGAGGAAGAGGAAGACCTAAAAGTGCATCTGCCAAAAAACATGAGGAAGA
AAGAGAGAAACAGGAAAAGGAAATAGACATCTATGCTAACCTCTCTGATGAAAAGGCTTTCGTGTTTTCAGTCGCCTTGG
CAGAAATAAATAGAAAAATTATCAATCAAAGACTTATTCTC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 6 .01 RPM |
| SRP017611_kidney | 6 .49 RPM |
| SRP017611_brain | 7 .76 RPM |
| SRP040447_lung | 4 .59 RPM |
| SRP040447_skeletal_muscle | 3 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000003679 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000006412 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000013316 | ortholog_one2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000008921 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1197 | 72.93 | 89.80 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_1228 | 78.95 | 76.87 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000010228 retrocopies