Parental gene:

CMPK1, ENSCAFG00000004030

Aliases:None
Description:cytidine monophosphate (UMP-CMP) kinase 1, cytosolic [Source:HGNC Symbol;Acc:18170]
Organism:Dog (Canis familiaris)
Coordinates:15:13326516..13357358(-)


>ENSCAFG00000004030
ATGGTGAGCTGCTGCGGCCGCAGGCTGCTGCACGTCCTGGGCCTTAGCTTCCCCCTGCTGACCCGCCCGCCGCTTTTCCT
CTGCCCTCGCCGCCTCATGAAACCGCTGGTCGTGTTCGTCCTCGGCGGTCCTGGCGCCGGCAAGGGGACCCAGTGCGCCC
GCATCGTCGAGAAATATGGCTACACACACCTTTCTGCAGGAGAACTTCTTCGTGATGAAAGGAAGAACCCAGCTTCACAG
TATGGTGAACTCATTGAAAAGTACATTAAAGATGGAAAGATTGTGCCAGTTGAGATAACCATCAGTTTGTTAAAGAGGGA
AATGGATCAGACAATGGCTGCCAATGCTCAGAAGAATAAATTCTTGATTGATGGGTTTCCAAGAAATCAAGACAACCTTC
AAGGTTGGAATAAGACCATGGATGGGAAAGCAGATGTGTCTTTTGTTCTGTTTTTTGACTGTAATAATGAGATCTGTATT
GAACGATGTCTTGAGAGGGGAAAGAGCAGTGGTAGAAGTGATGACAACAGAGAGAGCTTGGAAAAGAGAATTCAGACCTA
TCTTCAATCAACAAAGCCAATTATTGACTTATATGAAGAAATGGGGAAAGTCAAGAAAATAGATGCCTCTAAGTCTGTTG
ACGAGGTTTTTGATGAAGTTGTGAAGATTTTTGACAAAGAAGGCTAA

Library Parental gene expression (RPM)
SRP012049_cerebellum 39 .39 RPM
SRP017611_brain 29 .85 RPM
SRP017611_kidney 49 .86 RPM
SRP017611_liver 23 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004014 possible_ortholog 2 retrogenes
retro_chof_609, retro_chof_840,
Cavia porcellus ENSCPOG00000014747 ortholog_one2one 4 retrogenes
retro_cpor_1070, retro_cpor_1295, retro_cpor_417, retro_cpor_799,
Macaca mulatta ENSMMUG00000017375 possible_ortholog 2 retrogenes
retro_mmul_1572, retro_mmul_66,
Mustela putorius furo ENSMPUG00000012394 ortholog_one2one 1 retrogene
retro_mputfur_1061,
Mus musculus ENSMUSG00000028719 ortholog_one2one 1 retrogene
retro_mmus_2576,
Rattus norvegicus ENSRNOG00000007775 ortholog_one2one 1 retrogene
retro_rnor_1940,
Sus scrofa ENSSSCG00000003885 ortholog_one2one 1 retrogene
retro_sscr_454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1729 75.19 56.58
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Download FASTA sequences of all ENSCAFG00000004030 retrocopies