Parental gene: | AKR1A1, ENSCAFG00000004549 |
| Aliases: | None |
| Description: | Canis lupus familiaris aldo-keto reductase family 1, member A1 (aldehyde reductase) (AKR1A1), mRNA. [Source:RefSeq mRNA;Acc:NM_001252168] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 15:14792397..14808592(-) |
>ENSCAFG00000004549
ATGGCGGCTTCATGTGTCCTCCTGCACACTGGGCAGAAGATGCCCCTGATTGGGCTGGGCACCTGGAAGAGTGATCCTGG
CCAGGTAAAAGCAGCTATTATGTATGCCCTGAGTGTAGGCTACCGCCACATTGACTGTGCTGCTATCTACGGCAATGAGG
CTGAGATCGGGGAGGCCCTGAAGGAGAATGTAGGACCTGGCAAGGTGGTGCTTCGAGAGGAGCTGTTTGTGACTTCTAAG
CTGTGGAACACTAAACACCACCCCAAGGATGTGGAGCCTGCCCTCCGGAAGACACTGGCTGACCTCCAGCTGGAGTATTT
GGACCTGTACCTGATGCACTGGCCTTATGCCTTTGAGCGGGGAGACAACCCTTTCCCTAAAAATGCCGATGGGACAATCC
GCTATGACTCTACCCACTACAAGGAGACCTGGAAAGCTCTGGAGGCACTGGTGGCTAAGGGACTGGTACGAGCACTGGGC
CTGTCCAATTTCAGCAGTCGGCAGATCGATGATGTGCTCAGTGTGGCCTCTGTACGCCCAGCTGTCCTGCAGGTGGAATG
TCACCCATACTTGGCTCAGAAGGAGCTGATTGCTCATTGCCAAGCACGTGGCCTGGAGGTGACCGCTTATAGCCCTCTGG
GATCCTCTGATAGAGCTTGGCGTGATCCTGATGAGCCTGTCCTACTTGAGGAGCCGGTAGTCTTGGCACTGGCTGAAAAG
TATGGCCGGTCTCCAGCTCAGATCCTGCTCAGGTGGCAGGTCCAGCGGAAAGTGATCTGCATCCCCAAGAGTATCACACC
TTCACGTATTCTCCAGAACATCCAGGTGTTTGACTTCACCTTTAGCCCAGACGAGATGAAGCAGCTAGATGCCCTGAATA
AAAATTGGCGATACATTGTGCCCATGCTCACAGTGGATGGGAAGAGGGTCCCGAGAGATGCAGGGCATCCTCTGTACCCC
TTTAATGATCCATACTGA
ATGGCGGCTTCATGTGTCCTCCTGCACACTGGGCAGAAGATGCCCCTGATTGGGCTGGGCACCTGGAAGAGTGATCCTGG
CCAGGTAAAAGCAGCTATTATGTATGCCCTGAGTGTAGGCTACCGCCACATTGACTGTGCTGCTATCTACGGCAATGAGG
CTGAGATCGGGGAGGCCCTGAAGGAGAATGTAGGACCTGGCAAGGTGGTGCTTCGAGAGGAGCTGTTTGTGACTTCTAAG
CTGTGGAACACTAAACACCACCCCAAGGATGTGGAGCCTGCCCTCCGGAAGACACTGGCTGACCTCCAGCTGGAGTATTT
GGACCTGTACCTGATGCACTGGCCTTATGCCTTTGAGCGGGGAGACAACCCTTTCCCTAAAAATGCCGATGGGACAATCC
GCTATGACTCTACCCACTACAAGGAGACCTGGAAAGCTCTGGAGGCACTGGTGGCTAAGGGACTGGTACGAGCACTGGGC
CTGTCCAATTTCAGCAGTCGGCAGATCGATGATGTGCTCAGTGTGGCCTCTGTACGCCCAGCTGTCCTGCAGGTGGAATG
TCACCCATACTTGGCTCAGAAGGAGCTGATTGCTCATTGCCAAGCACGTGGCCTGGAGGTGACCGCTTATAGCCCTCTGG
GATCCTCTGATAGAGCTTGGCGTGATCCTGATGAGCCTGTCCTACTTGAGGAGCCGGTAGTCTTGGCACTGGCTGAAAAG
TATGGCCGGTCTCCAGCTCAGATCCTGCTCAGGTGGCAGGTCCAGCGGAAAGTGATCTGCATCCCCAAGAGTATCACACC
TTCACGTATTCTCCAGAACATCCAGGTGTTTGACTTCACCTTTAGCCCAGACGAGATGAAGCAGCTAGATGCCCTGAATA
AAAATTGGCGATACATTGTGCCCATGCTCACAGTGGATGGGAAGAGGGTCCCGAGAGATGCAGGGCATCCTCTGTACCCC
TTTAATGATCCATACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 19 .93 RPM |
| SRP017611_kidney | 305 .42 RPM |
| SRP017611_liver | 34 .66 RPM |
| SRP012049_cerebellum | 28 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000001290 | within_species_paralog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000013633 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000006450 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000007370 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007175 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005301 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000012180 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_558 | 99.38 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000004549 retrocopies