Parental gene:

ABCF2, ENSCAFG00000004830

Aliases:None
Description:ATP-binding cassette, sub-family F (GCN20), member 2 [Source:HGNC Symbol;Acc:71]
Organism:Dog (Canis familiaris)
Coordinates:16:15258410..15266417(-)


>ENSCAFG00000004830
ATGCCCTCTGACCTGGCCAAGAAGAAGGCAGCCAAAAAGAAGGAAGCTGCCAAAGCACGACAGCGGCCCAGAAAGGGACA
CGAAGAAAACGGAGATACTGTCACAGAACCACAGGTGGCAGAGGAGAAAAGTGAGGCCAATGGCCGAGAGACCACAGAAT
TGGATTTGCTGACCAAGGAACTAGAGGACTTTGAGATGAAGAAAGCTGCTGCTCGAGCTGTCACTGGTGTTCTTGCCTCT
CACCCCAACAGTACTGATGCCCACATTATCAACCTCTCCCTCACCTTTCATGGTCAAGAGCTGCTCAGCGACACCAAACT
GGAATTAAACTCAGGCCGTCGTTATGGCCTCATTGGCTTAAATGGAATTGGAAAGTCCATGCTGCTCTCTGCTATTGGGA
AACGGGAAGTGCCCATCCCTGAGCACATTGACATATACCATCTGACTCGGGAGATGCCCCCTAGTGAGAAGACACCCTTG
CAGTGTGTGATGGAAGTCGACACAGAGCGAGCCATGCTGGAGAGGGAAGCTGAGCGGCTGGCTCACGAGGATGCTGAGTG
TGAGAAGCTCATGGAGCTCTACGAGCGACTGGAGGAGCTGGATGCTGACAAGGCGGAAATGAGGGCTTCCCGGATCTTGC
ATGGACTGGGTTTCACGCCTGCCATGCAGCGCAAGAAGCTGAAAGACTTCAGTGGGGGCTGGAGAATGAGGGTTGCCCTC
GCCAGAGCCCTCTTCATTCGGCCCTTCATGCTGCTCCTGGACGAGCCCACCAACCACCTGGACCTCGATGCTTGTGTGTG
GTTGGAAGAAGAATTAAAGACTTTTAAGCGTATCCTGGTCCTCGTCTCCCATTCCCAGGACTTTCTGAATGGTGTCTGTA
CCAACATCATTCATATGCACAACAAGAAACTGAAGTATTACACGGTGAGTAGGCCCCAGCTTCTCCACAGCAACCTCTCT
ACTTATCAGCTCCTTGAAGCTCTCCTTTAA

Library Parental gene expression (RPM)
SRP017611_brain 21 .99 RPM
SRP017611_kidney 9 .71 RPM
SRP017611_liver 6 .24 RPM
SRP012049_cerebellum 17 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000020371 ortholog_one2one 3 retrogenes
retro_cjac_1859, retro_cjac_3526, retro_cjac_381,
Dipodomys ordii ENSDORG00000012672 ortholog_one2one 1 retrogene
retro_dord_334,
Echinops telfairi ENSETEG00000008032 ortholog_one2one 2 retrogenes
retro_etel_1041, retro_etel_1058,
Macaca mulatta ENSMMUG00000006679 ortholog_one2one 1 retrogene
retro_mmul_1414,
Oryctolagus cuniculus ENSOCUG00000000245 ortholog_one2one 1 retrogene
retro_ocun_765,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1612 81.82 93.01
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Download FASTA sequences of all ENSCAFG00000004830 retrocopies