Parental gene:

ABCF2, ENSOCUG00000000245

Aliases:None
Description:ATP-binding cassette, sub-family F (GCN20), member 2 [Source:HGNC Symbol;Acc:71]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:13:12622729..12633979(-)


>ENSOCUG00000000245
ATGCCCTCTGACCTGGCCAAGAAGAAAGCAGCCAAAAAGAAGGAGGCTGCCAAGGCTCGGCAGCGGCCCAAAAAGGGGCA
CGAGGAGAATGGAGACGCTGTCACAGAGCCACAGGTGGCCGAGGAGAAAAACGAGGCCAATGGCAGAGAGGCCACAGAGG
TGGATTTGCTGACCAAGGAGCTGGAAGACTTCGAGCTGAAGAAAGCGGCTGCCCGAGCTGTGACTGGTGTCCTGGCCTCT
CACCCCAACAGTACTGACGTCCACATCATCAACCTCTCACTCACCTTCCACGGGCAAGAGCTGCTCAGTGACACCAAGCT
GGAGTTAAACTCAGGCCGCCGCTATGGCCTCATTGGGTTAAATGGAATCGGGAAGTCCATGTTGCTGTCTGCCATTGGGA
AGCGGGAAGTGCCCATCCCTGAGCACATCGACATCTACCACCTGACTCGGGAGATGCCGCCTAGTGACAAGACGCCTCTG
CAGTGCGTGATGGAGGTGGACACGGAGCGGGCCATGCTGGAGAGGGAGGCCGAGCGGCTGGCTCACGAGGACGCGGAGTG
TGAGAAGCTCATGGAGTTGTACGAGCGCCTGGAGGAGCTGGACGCCGACAAGGCGGAGATGAGGGCCTCGCGGATCCTGC
ACGGCCTGGGCTTCACCCCCGCCATGCAGCGCAAGAAGCTGAAAGACTTCAGTGGCGGCTGGAGGATGAGGGTTGCCCTC
GCCAGAGCCCTCTTTATCCGGCCCTTCATGCTGCTTCTGGATGAGCCCACCAACCACTTGGACCTAGATGCTTGTGTGTG
GTTGGAAGAAGAACTGAAAACTTTTAAGCGCATCCTGGTTCTCGTCTCCCATTCCCAGGATTTTCTGAATGGTGTCTGCA
CCAACATCATTCACATGCACAACAAGAAACTGAAGTATTATACGGGTAACTATGATCAGTACGTAAAGACACGGCTGGAG
CTGGAGGAGAACCAGATGAAGAGGTTCCACTGGGAGCAAGATCAGATCGCGCACATGAAGAACTACATCGCTAGGTTTGG
TCATGGCAGTGCAAAGCTGGCCCGGCAAGCCCAGAGCAAGGAGAAGACGCTACAGAAGATGATGGCGTCGGGACTAACAG
AGAGGGTCGTGAGCGACAAGACACTGTCGTTTTACTTCCCACCATGTGGCAAGATCCCACCGCCTGTCATCATGGTGCAA
AACGTGAGCTTCAAGTACACAAAAGATGGGCCTTGCATCTACAATAATCTAGAATTTGGTATCGACCTCGACACACGAGT
GGCTCTGGTAGGGCCCAATGGAGCAGGGAAGTCAACTCTTTTGAAGCTGCTGACTGGAGAGCTACTACCTACAGACGGAA
TGATCCGGAAACATTCTCACGTCAAGATAGGGCGTTACCATCAGCATTTACAAGAGCAGCTGGACCTGGATCTCTCGCCT
CTGGAGTACATGATGAAGTGCTACCCAGAGATCAAGGAGAAGGAAGAGATGAGGAAGATCATCGGGCGGTACGGGCTCAC
TGGGAAGCAGCAGGTGAGCCCAATCCGGAACTTGTCAGACGGGCAGAAGTGCAGAGTGTGTCTGGCCTGGCTGGCCTGGC
AGAACCCCCACATGCTCTTCCTGGACGAGCCCACCAACCACCTGGATATTGAGACCATCGACGCGCTGGCAGACGCCATC
AATGAGTTTGAGGGTGGGATGATGCTGGTCAGCCATGACTTCAGACTCATTCAGCAGGTTGCACAGGAAATTTGGGTCTG
TGAGAAGCAGACAATCACCAAGTGGCCTGGAGACATCCTGGCCTACAAGGAGCACCTCAAGTCCAAGTTGGTAGATGAGG
AGCCCCAGCTCACCAAGAGGACCCACAACGTTTACATTCGGCCGCGTCTGGACTTGGCTGGCTGTTCCCTCCAGCCCCTT
GCTGGTTACTTACCCCGAGAGTGA

Library Parental gene expression (RPM)
SRP017611_liver 16 .03 RPM
SRP017611_kidney 53 .82 RPM
SRP017611_brain 93 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000004830 ortholog_one2one 1 retrogene
retro_cfam_1612,
Callithrix jacchus ENSCJAG00000020371 ortholog_one2one 3 retrogenes
retro_cjac_1859, retro_cjac_3526, retro_cjac_381,
Dipodomys ordii ENSDORG00000012672 ortholog_one2one 1 retrogene
retro_dord_334,
Echinops telfairi ENSETEG00000008032 ortholog_one2one 2 retrogenes
retro_etel_1041, retro_etel_1058,
Macaca mulatta ENSMMUG00000006679 ortholog_one2one 1 retrogene
retro_mmul_1414,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_765 66.67 52.55
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Download FASTA sequences of all ENSOCUG00000000245 retrocopies