Parental gene: | ENSCAFG00000005180 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 17:21580212..21793234(+) |
>ENSCAFG00000005180
ATGGCTGATAGTCCCTCTCCGTCCGAGTCGCTGGCTTCGCAAGAGCGCAGTGATGACTTCAAGAAACCAACCCTGCCGGT
GCCCCCGGTCGTGCGGGGCAAAGCTCCGGCCACCAGTCCTGCGAACCCTGAGGAGGTAAAGAAGGAAAGGCCCACGGCGC
TGCCAGAGCCCGACCCCGGGGAGCCCGACGTCCCGCCAGTCCAGCCCGACAGCGGGGACACCAGGAGTCCACCGACGGAG
CAGCCGCGGCCCCCCTCAGCGGCTCCTTCAGCTGGCGGCCCGGCCCGGGCTCCCCCTTACCGGGAGCCGCCGTGGGGCGG
CCCCGCCTCGGCCCCCTACAGCCTAGAGACGCTCAAGGGCGGCACCATCCTTGGCACCCGCAGCTTGAAAGGGACGAGTT
GCTGCCTCTTCGGGAGGCTGTCTAGCTGCGACGTGTGCCTGGAGCACCCTTCGGTGTCCCGGTACCACGCCGTGCTGCAG
CACAGGGCGGCCGGCCTCGAAGGAGAATGCGACGGCCAAGGGCCGGGCTTCTACCTTTACGATCTGGGAAGCACCCACGG
CACTTTTCTTAACAAAACCCGCATCCCACCCCGCACCTATCATCGCGTCCACGTCGGGCACGTTCTTCGCTTTGGAGGCA
GCACCCGGCTCTTTCTTCTTCAGGGACCAGAGGAAGACCGAGAGGCAGAATCCGAGCTGACCGTAACGCAACTGAAGGAA
TTGCGCAAGCAGCAGCAAATGATGTTGGAGAAGAAGATGTTGGGAGAAGACTCGGATGAGGAAGAAGTGGACACCACCGA
AAGGAAGAGAAATACTAGTAGTCAAGATGATGAAATGGGCTGTACCTGGGGAATGGGAGAAGATGCTGTAGAGGATGAGG
CTGAAGAGAACCCCATTGTCTTAGAGTTTCAGCAGGAAAGGGAGGCCTTTTATATAAAGGATCCAAAAAAGGCTCTCCAA
GGTTTTTTTGACCGAGAAGGAGAAGAATTAGAATATGAATTTGATGAACAGGGGCATAGCACTTGGCTCTGCAGGGTGAG
ATTACCTGTGGATGATTCAACTGGAAAACAACTGGTAGCTGAGGCCATTCATTCAGGAAAGAAAAAAGAAGCAATGATCC
AATGTTCACTGGAAGCTTGTCGAATCCTTGATACTTTGGGATTGCTGCGGCAGGAGGCAGTATCTCGAAAAAGGAAAGCC
AAGAACTGGGAGGATGAAGACTTTTATGATAGTGATGATGACACATTTCTTGATCGGACTGGCCTCGTTGAAAAGAAGCG
TCTGAACCGAATGAAAAAGGCTGGGAAGATTGATGAGAAGCCAGAGACCTTTGAATCATTGGTTGCAAAATTAAATGATG
CTGAAAAGGAACTCTCTGAAATTTCTGAGAAACTGAAAGCCTCAAGCAAAGCTCTATCAGAGTCACCATCTCAGGACTCT
TTAGATGCATTCATGTCAGAAATGAAATCAGGGAGTGCATTGGATGGTGTGTCCCGGAAGAAACTTCACCTGAGAACTTT
TGAACTTAGGAAAGAACAACAGAGACTTAAAGGGTTGATAAAAATTGTAAAACCAGCAGAGATTCCAGAGCTGAAAAAGA
CTGAAAGTCAGACTACAGATGTGGAAAACAAAGCTAAAAAGCTTACATTGCCTCTTTTTGGTGCCATGAAAGGAGGAAGC
AAATTCAAATTAAAAACGGGAACAGTAGGGAAGTTACCCCCCAAGCGTCCTGAACTCCCTGCAGCTCTGATGAGAATGAA
GGATGAGCCTGAAGTAGAAGAGGAGGAAGAAGAGGAGGAGGAAGAGGAAAAGGAAAAGGAGAGGGATGAAAGGGGGGACA
TGGAGACTGGAAGCAGTAGGCTGCAGCAGGAGACAGAGCTGGAAGAAGCAGTGCAGGACACAAGGCCTCCTACTGACCTC
ATGTGTTCTAAAGAAACAAAAACCCATGAAAACAAGTCTCAACTCACCCAACTGGAACAGATTAAAGATTATCAAGAGAT
TAGTGAAACAGCTGCATCATGTGAGGAACCCTCAGCATCAAAGAATAAATATGAGAAAAACAGAGATGAACTGAAGGAAA
AAAAAGCTCCTGGTCCAGGCAAACTTCCAGCAACACTTTCCTCCAAATATCCAGAAGATGACCCAGACTACTGTGTGTGG
GTCCCACCTGAAGTTGCCAAGAGCAAGTCAAAAACCATTCTGGTGAAAATGCTGAGCCAAGCTGGAACAGGTTACTCCTT
CAACACTAAGAGAAGCCGACTACGGGAGAAACTCACTCTCTTACATTATGACCCAATTGGTAAGATTCAGATAAATTACT
CCAAAATAAATTCAGATGCTTTCAAGGTCTGCTGCCCTTTCCAGAATGAAGCTTAA
ATGGCTGATAGTCCCTCTCCGTCCGAGTCGCTGGCTTCGCAAGAGCGCAGTGATGACTTCAAGAAACCAACCCTGCCGGT
GCCCCCGGTCGTGCGGGGCAAAGCTCCGGCCACCAGTCCTGCGAACCCTGAGGAGGTAAAGAAGGAAAGGCCCACGGCGC
TGCCAGAGCCCGACCCCGGGGAGCCCGACGTCCCGCCAGTCCAGCCCGACAGCGGGGACACCAGGAGTCCACCGACGGAG
CAGCCGCGGCCCCCCTCAGCGGCTCCTTCAGCTGGCGGCCCGGCCCGGGCTCCCCCTTACCGGGAGCCGCCGTGGGGCGG
CCCCGCCTCGGCCCCCTACAGCCTAGAGACGCTCAAGGGCGGCACCATCCTTGGCACCCGCAGCTTGAAAGGGACGAGTT
GCTGCCTCTTCGGGAGGCTGTCTAGCTGCGACGTGTGCCTGGAGCACCCTTCGGTGTCCCGGTACCACGCCGTGCTGCAG
CACAGGGCGGCCGGCCTCGAAGGAGAATGCGACGGCCAAGGGCCGGGCTTCTACCTTTACGATCTGGGAAGCACCCACGG
CACTTTTCTTAACAAAACCCGCATCCCACCCCGCACCTATCATCGCGTCCACGTCGGGCACGTTCTTCGCTTTGGAGGCA
GCACCCGGCTCTTTCTTCTTCAGGGACCAGAGGAAGACCGAGAGGCAGAATCCGAGCTGACCGTAACGCAACTGAAGGAA
TTGCGCAAGCAGCAGCAAATGATGTTGGAGAAGAAGATGTTGGGAGAAGACTCGGATGAGGAAGAAGTGGACACCACCGA
AAGGAAGAGAAATACTAGTAGTCAAGATGATGAAATGGGCTGTACCTGGGGAATGGGAGAAGATGCTGTAGAGGATGAGG
CTGAAGAGAACCCCATTGTCTTAGAGTTTCAGCAGGAAAGGGAGGCCTTTTATATAAAGGATCCAAAAAAGGCTCTCCAA
GGTTTTTTTGACCGAGAAGGAGAAGAATTAGAATATGAATTTGATGAACAGGGGCATAGCACTTGGCTCTGCAGGGTGAG
ATTACCTGTGGATGATTCAACTGGAAAACAACTGGTAGCTGAGGCCATTCATTCAGGAAAGAAAAAAGAAGCAATGATCC
AATGTTCACTGGAAGCTTGTCGAATCCTTGATACTTTGGGATTGCTGCGGCAGGAGGCAGTATCTCGAAAAAGGAAAGCC
AAGAACTGGGAGGATGAAGACTTTTATGATAGTGATGATGACACATTTCTTGATCGGACTGGCCTCGTTGAAAAGAAGCG
TCTGAACCGAATGAAAAAGGCTGGGAAGATTGATGAGAAGCCAGAGACCTTTGAATCATTGGTTGCAAAATTAAATGATG
CTGAAAAGGAACTCTCTGAAATTTCTGAGAAACTGAAAGCCTCAAGCAAAGCTCTATCAGAGTCACCATCTCAGGACTCT
TTAGATGCATTCATGTCAGAAATGAAATCAGGGAGTGCATTGGATGGTGTGTCCCGGAAGAAACTTCACCTGAGAACTTT
TGAACTTAGGAAAGAACAACAGAGACTTAAAGGGTTGATAAAAATTGTAAAACCAGCAGAGATTCCAGAGCTGAAAAAGA
CTGAAAGTCAGACTACAGATGTGGAAAACAAAGCTAAAAAGCTTACATTGCCTCTTTTTGGTGCCATGAAAGGAGGAAGC
AAATTCAAATTAAAAACGGGAACAGTAGGGAAGTTACCCCCCAAGCGTCCTGAACTCCCTGCAGCTCTGATGAGAATGAA
GGATGAGCCTGAAGTAGAAGAGGAGGAAGAAGAGGAGGAGGAAGAGGAAAAGGAAAAGGAGAGGGATGAAAGGGGGGACA
TGGAGACTGGAAGCAGTAGGCTGCAGCAGGAGACAGAGCTGGAAGAAGCAGTGCAGGACACAAGGCCTCCTACTGACCTC
ATGTGTTCTAAAGAAACAAAAACCCATGAAAACAAGTCTCAACTCACCCAACTGGAACAGATTAAAGATTATCAAGAGAT
TAGTGAAACAGCTGCATCATGTGAGGAACCCTCAGCATCAAAGAATAAATATGAGAAAAACAGAGATGAACTGAAGGAAA
AAAAAGCTCCTGGTCCAGGCAAACTTCCAGCAACACTTTCCTCCAAATATCCAGAAGATGACCCAGACTACTGTGTGTGG
GTCCCACCTGAAGTTGCCAAGAGCAAGTCAAAAACCATTCTGGTGAAAATGCTGAGCCAAGCTGGAACAGGTTACTCCTT
CAACACTAAGAGAAGCCGACTACGGGAGAAACTCACTCTCTTACATTATGACCCAATTGGTAAGATTCAGATAAATTACT
CCAAAATAAATTCAGATGCTTTCAAGGTCTGCTGCCCTTTCCAGAATGAAGCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 24 .29 RPM |
| SRP017611_kidney | 24 .76 RPM |
| SRP017611_liver | 11 .31 RPM |
| SRP012049_cerebellum | 24 .61 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000012023 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_24 | 98.46 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000005180 retrocopies