Parental gene:

PPP1R8, ENSCAFG00000012023

Aliases:None
Description:protein phosphatase 1, regulatory subunit 8 [Source:HGNC Symbol;Acc:9296]
Organism:Dog (Canis familiaris)
Coordinates:2:72520896..72582873(-)


>ENSCAFG00000012023
ATGGCGGCAGCCGCGAACTCCGGCTCAAGCCTCCCGCTGTTCGACTGTCCGACCTGGGCAGGTAAACCCCCACCTGGTTT
ACATCTGGATGTAGTCAAAGGAGACAAGCTAATTGAGAAACTGATTATTGATGAGAAGAAGTATTACTTATTTGGGAGAA
ACCCTGATTTGTGTGACTTTACCATTGACCACCAGTCTTGCTCTCGGGTCCACGCTGCCTTGGTCTACCACAAGCATCTG
AAGAGAGTTTTCCTAATAGATCTCAACAGTACACACGGCACTTTCTTGGGTCACATTCGGTTGGAACCTCACAAGCCTCA
GCAAATTCCCATCGATTCCACAGTCTCGTTTGGCGCATCCACAAGGGCCTACACTCTACGTGAGAAGCCTCAGACACTGC
CGTCAGCTGTGAAGGGAGATGAGAAGATGGGTGGAGAGGATGATGAGCTCAAGGGCCTCCTGGGGCTTCCAGAGGAGGAG
ACCGAGCTTGATAACCTGACAGAGTTCAACACTGCCCACAACAAGCGGATTTCCACCCTGACCATTGAGGAGGGGAATCT
CGACATTCAGAGACCAAAGAGGAAGAGGAAGAACTCGCGGGTGACTTTCAGTGAGGATGATGAGATCATCAACCCAGAGG
ATGTGGATCCCTCAGTCGGTCGCTTCCGGAACATGGTGCAGACTGCTGTGGTCCCCGTCAAGAAGAAGCGGGTGGAAGGC
CCTGGCTCCCTGGGCCTGGAGGAATCGGGGAGCAGGCGCATGCAGAACTTTGCATTCAGTGGAGGACTCTATGGGGGCCT
GCCCCCCACACACAGCGAAGCCGGCTCCCAGCCGCATGGTATCCACGGGACAGCACTCATCGGTGGCTTGCCCATGCCAT
ACCCGAACCTCGCCCCTGACGTGGACTTGACTCCCGTCGTGCCGTCAGCAGTGAACATGAACCCTGCACCAAACCCTGCA
GTCTATAACCCTGAAGCCGTCAACGAACCCAAGAAGAAAAAATATGCAAAAGAGGCTTGGCCGGGCAAGAAGCCCACACC
TTCCTTACTGATTTGA

Library Parental gene expression (RPM)
SRP017611_brain 63 .20 RPM
SRP017611_kidney 35 .66 RPM
SRP017611_liver 13 .63 RPM
SRP012049_cerebellum 86 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005180 within_species_paralog 1 retrogene
retro_cfam_24,
Homo sapiens ENSG00000117751 ortholog_one2one 1 retrogene
retro_hsap_380,
Gorilla gorilla ENSGGOG00000012062 ortholog_one2one 1 retrogene
retro_ggor_387,
Loxodonta africana ENSLAFG00000017834 ortholog_one2one 1 retrogene
retro_lafr_1173,
Macaca mulatta ENSMMUG00000006933 ortholog_one2one 1 retrogene
retro_mmul_491,
Pan troglodytes ENSPTRG00000000417 ortholog_one2one 1 retrogene
retro_ptro_296,
Ictidomys tridecemlineatus ENSSTOG00000004381 ortholog_one2one 2 retrogenes
retro_itri_1611, retro_itri_1704,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_334 59.57 64.49
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Download FASTA sequences of all ENSCAFG00000012023 retrocopies