Parental gene:

EMC3, ENSCAFG00000005202

Aliases:None
Description:ER membrane protein complex subunit 3 [Source:HGNC Symbol;Acc:23999]
Organism:Dog (Canis familiaris)
Coordinates:20:8296813..8315218(+)


>ENSCAFG00000005202
ATGGCGGGGCCGGAGCTGCTGCTCGACTCCAACATCCGCCTTTGGGTGGTCCTACCCATCGTTATCATCACCTTCTTTGT
GGGCATGATCCGCCACTACGTGTCCATCCTGCTGCAGAGCGACAAGAAGCTCACTCAGGAACAAGTCTCCGACAGTCAAG
TCCTAATTCGAAGCAGAGTCCTCAGGGAAAATGGAAAATACATTCCCAAACAGTCTTTCTTGACACGAAAATATTACTTC
AACAACCCAGAGGATGGATTTTTCAAAAAAACTAAAAGGAAGGTAGTGCCTCCTTCTCCTATGACTGATCCCACTATGCT
CACAGACATGATGAAAGGCAATGTGACAAATGTTCTCCCTATGATTCTTATTGGTGGCTGGATCAACATGACATTCTCCG
GCTTTGTCACAACCAAGGTCCCATTTCCACTGACTCTCCGTTTTAAGCCTATGCTACAGCAGGGAATTGAACTACTCACA
TTAGATGCATCCTGGGTGAGCTCTGCATCCTGGTACTTCCTCAATGTCTTTGGGCTTCGGAGCATTTACTCTCTGATTTT
GGGCCAAGATAATGCCGCTGACCAGTCACGGATGATGCAGGAACAGATGACTGGAGCAGCCATGGCCATGCCTGCGGACA
CCAACAAAGCTTTCAAGAGTGGGAAGCTTTGGAGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 50 .65 RPM
SRP017611_kidney 66 .70 RPM
SRP017611_liver 18 .93 RPM
SRP012049_cerebellum 46 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000037305 ortholog_one2one 1 retrogene
retro_cjac_3209,
Equus caballus ENSECAG00000024410 ortholog_one2one 1 retrogene
retro_ecab_737,
Felis catus ENSFCAG00000024898 ortholog_one2one 2 retrogenes
retro_fcat_1932, retro_fcat_2002,
Microcebus murinus ENSMICG00000002333 ortholog_one2one 2 retrogenes
retro_mmur_439, retro_mmur_707,
Mustela putorius furo ENSMPUG00000017149 ortholog_one2one 1 retrogene
retro_mputfur_456,
Pteropus vampyrus ENSPVAG00000012615 ortholog_one2one 3 retrogenes
retro_pvam_1260, retro_pvam_1278, retro_pvam_1439,
Tursiops truncatus ENSTTRG00000007554 ortholog_one2one 2 retrogenes
retro_ttru_1311, retro_ttru_285,
Vicugna pacos ENSVPAG00000003247 ortholog_one2one 2 retrogenes
retro_vpac_308, retro_vpac_461,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_730 95.77 84.00
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Download FASTA sequences of all ENSCAFG00000005202 retrocopies