Parental gene:

EMC3, ENSECAG00000024410

Aliases:None
Description:ER membrane protein complex subunit 3 [Source:HGNC Symbol;Acc:23999]
Organism:Horse (Equus caballus)
Coordinates:16:6896886..6915097(+)


>ENSECAG00000024410
ATGGCAGGGCCAGAGCTGCTGCTCGACTCTAACATCCGCCTCTGGGTGGTCCTGCCCATCGTTATCATCACCTTTTTCGT
GGGCATGATCCGCCACTACGTATCCATCCTGCTTCAGAGCGACAAGAAGCTCACCCAGGAACAAGTCTCCGACAGTCAAG
TCCTAATTCGAAGCAGAGTCCTCAGGGAAAATGGAAAATACATTCCCAAACAGTCTTTCTTGACACGAAAATACTACTTC
AACAACCCAGAGGATGGATTTTTCAAAAAAACTAAAAGGAAGGTAGTGCCTCCTTCTCCTATGACTGATCCCACTATGCT
CACAGACATGATGAAAGGCAATGTAACAAATGTCCTCCCTATGATTCTTATTGGTGGATGGATCAACATGACATTTTCAG
GCTTTGTCACAACCAAGGTCCCGTTTCCACTGACCCTCCGTTTTAAGCCTATGCTACAGCAAGGAATCGAACTTCTCACG
TTAGATGCATCCTGGGTGAGTTCAGCATCCTGGTACTTCCTCAATGTCTTTGGGCTTCGGAGCATTTACTCTCTGATTCT
TGGCCAAGATAATGCTGCTGACCAATCACGGATGATGCAGGAGCAGATGACGGGAGCAGCCATGGCCATGCCCGCAGACA
CCAACAAAGCTTTCAAGACAGAGTGGGAAGCGTTGGAGCTGACGGATCACCAGTGGGCACTAGATGACGTCGAAGAGGAG
CTTATGGCCAAGGACCTCCACTTCGAAGGCATGTTCAAAAAGGAGCTACAGACCTCTATTTTTTGA

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 30 .58 RPM
SRP021940_cerebellum 46 .95 RPM
SRP021940_embryo 31 .58 RPM
SRP021940_placental_villous 69 .81 RPM
SRP021940_synovial_membrane 28 .44 RPM
SRP021940_testis 105 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005202 ortholog_one2one 1 retrogene
retro_cfam_730,
Callithrix jacchus ENSCJAG00000037305 ortholog_one2one 1 retrogene
retro_cjac_3209,
Felis catus ENSFCAG00000024898 ortholog_one2one 2 retrogenes
retro_fcat_1932, retro_fcat_2002,
Microcebus murinus ENSMICG00000002333 ortholog_one2one 2 retrogenes
retro_mmur_439, retro_mmur_707,
Mustela putorius furo ENSMPUG00000017149 ortholog_one2one 1 retrogene
retro_mputfur_456,
Pteropus vampyrus ENSPVAG00000012615 ortholog_one2one 3 retrogenes
retro_pvam_1260, retro_pvam_1278, retro_pvam_1439,
Tursiops truncatus ENSTTRG00000007554 ortholog_one2one 2 retrogenes
retro_ttru_1311, retro_ttru_285,
Vicugna pacos ENSVPAG00000003247 ortholog_one2one 2 retrogenes
retro_vpac_308, retro_vpac_461,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_737 69.23 53.64
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Download FASTA sequences of all ENSECAG00000024410 retrocopies