Parental gene:

RNF13, ENSCAFG00000008370

Aliases:None
Description:ring finger protein 13 [Source:HGNC Symbol;Acc:10057]
Organism:Dog (Canis familiaris)
Coordinates:23:44529488..44684990(+)


>ENSCAFG00000008370
ATGCTGCTCTCCATAGGAATGCTCATGCTATCGGCCACACAAGTCTATACCATCTTGACTGTCCAGCTCTTTGCATTCTT
AAACCTACTACCTGTAGAAGCAGACATTTTAGCATATAATTTTGAAAATGCATCTCAGACATTTGATGACCTTCCAGCAA
GATTTGGTTATAGACTTCCAGCTGAAGGTTTAAAGGGTTTTTTGATTAACTCAAAACCAGAGAATGCCTGTGAACCCATA
GTGCCTCCACCACTAAAAGACAATTCATCGGGCACTTTCATCGTGTTAATTAGAAGACTTGATTGTAATTTTGATATAAA
GGTTTTAAATGCACAAAGAGCAGGATACAAAGCAGCCATAGTTCACAATGTTGACTCTGATGACCTCATTAGCATGGGAT
CCAACGACATTGATGTGCTAAAGAAAATTGACATTCCATCTGTCTTTATTGGGGAATCATCAGCTAATTCCCTGAAAGAT
GAATTTACATATGAAAAAGGGGGCCACATCATCTTAGTTCCAGAATTTAGTCTTCCTCTGGAATACTATCTAATCCCTTT
CCTTATCATAGTGGGCATCTGTCTCATTTTGATAGTCATTTTCATGATCACAAAATTTGTCCAGGACAGACATAGAGCCA
GAAGAAACAGACTTCGTAAAGATCAACTTAAGAAGCTCCCCGTGCATAAATTCAAAAAAGGAGATGAGTATGATGTATGT
GCCATTTGTTTGGATGAATATGAAGATGGAGACAAGCTCAGAATCCTCCCTTGTTCCCATGCTTACCACTGCAAGTGTGT
GGACCCCTGGCTAACTAAAACCAAAAAAACCTGTCCGGTCTGCAAGCAAAAAGTGGTTCCTTCCCAAGGCGACTCAGACT
CCGACACAGACAGCAGTCAAGAAGAAAATGAGGTGTCCGAACACACCCCTCTTCTTAGACCTTTGGCTTCTGTCAGCACC
CAGTCATTTGGGGCTTTGTCGGAATCTCGCTCACATCAGAATATGACCGAGTCTTCAGACTATGAAGAAGAGGACAACGA
AGACACCGACAGCAGTGACGCAGAAAATGAGATCAATGCGCACAGTGTTGTAGTCCAGCTGCAGCCTAATGGTGAACGGG
ATTACAACGTAGCAAACACGGTCTGA

Library Parental gene expression (RPM)
SRP017611_brain 98 .21 RPM
SRP017611_kidney 180 .48 RPM
SRP017611_liver 41 .77 RPM
SRP012049_cerebellum 60 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000010433 ortholog_one2one 1 retrogene
retro_amel_311,
Canis familiaris ENSCAFG00000015830 within_species_paralog 2 retrogenes
retro_cfam_1053, retro_cfam_84,
Dasypus novemcinctus ENSDNOG00000014687 ortholog_one2one 1 retrogene
retro_dnov_139,
Microcebus murinus ENSMICG00000001221 ortholog_one2one 1 retrogene
retro_mmur_323,
Nomascus leucogenys ENSNLEG00000003149 ortholog_one2one 1 retrogene
retro_nleu_627,
Pongo abelii ENSPPYG00000014202 ortholog_one2one 1 retrogene
retro_pabe_2392,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_815 71.14 51.44
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Download FASTA sequences of all ENSCAFG00000008370 retrocopies